EMLSAT00000005749, EMLSAT00000005749-701596 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005749
Unique NameEMLSAT00000005749-701596
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:832175..833365 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005749 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005749EMLSAG00000005749-688515Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025109EMLSAE00000025109-734037Lepeophtheirus salmonisexon
EMLSAE00000025110EMLSAE00000025110-734038Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779874auto779874Lepeophtheirus salmonispolypeptide
EMLSAP00000005749EMLSAP00000005749Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005749

>EMLSAP00000005749 ID=EMLSAP00000005749|Name=EMLSAP00000005749|organism=Lepeophtheirus salmonis|type=polypeptide|length=297bp
MFNRLISLRHPSLRLNFFRYISDYYEILGVPRNASSKDIKKAYYSKAKKY
HPDVAGDDPKAAELFKDISEAYEDFSPFGFGTNASEISISIPFIEAVKGI
SKDIEVVETSISYPQRIPKLIKRTLTVNIPPGIEDGQTLRMSIGGNKEIF
VTVRVEEXSHFRRSQYDVHTDASISIGQALLGGILRVKGLYSDLNVRIPS
GTSSHSTLRLEGKGIKKLDTFGGYGTHFVHLKIDVPQYISQEQKDLIYRF
ATLDENTPEWSVTGLKDFKSKKKDSSSDLEETESLGFFAKLKKKILG
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mRNA from alignment at LSalAtl2s309:832175..833365-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005749-701596 ID=EMLSAT00000005749-701596|Name=EMLSAT00000005749|organism=Lepeophtheirus salmonis|type=mRNA|length=1191bp|location=Sequence derived from alignment at LSalAtl2s309:832175..833365- (Lepeophtheirus salmonis)
GCAAAGTTGTTCCAGTCCGAACTCTACACAATGTTCAACAGACTCATTTC
TCTCCGCCATCCATCCCTTAGACTTAATTTTTTCCGCTATATATCCGACT
ACTACGAAATCCTTGGTGTTCCTCGAAACGCTTCCTCCAAGGACATTAAA
AAAGCCTATTACTCTAAAGCTAAGAAATATCATCCAGACGTTGCCGGAGA
CGATCCCAAAGCCGCTGAGCTTTTTAAAGACATTTCTGAGGCCTATGAAG
TGCTAAATGATTCTAAAACTCGAGCAAATTATGATGGTTCTTCTGTGAGG
CATGAAAAAGCTTCATCCTCAACACCTGGTCCGCAATACGAATGGGAGTT
TAGGGTAATTTGTAAATTTGGGTTTCTATTATATAAATTATTAATATGAT
TATTTGACAAGTTTTTAATTTAATTTTAGTCAAACATAAATCCTGAAGAC
TTGTTTCGTACAGTGTTCGGGGAATTTTCTCGAAATTTTGGAGGACGTAG
TGAAAGTGTATTTGAGGATTTTTCTCCTTTTGGCTTTGGAACAAATGCAT
CTGAGATTTCCATATCTATTCCTTTCATAGAAGCCGTGAAAGGAATATCT
AAGGATATTGAAGTTGTAGAAACTTCTATATCTTATCCCCAAAGAATTCC
CAAATTGATTAAAAGAACATTAACCGTTAACATCCCTCCAGGAATAGAGG
ATGGCCAAACTCTACGCATGAGTATTGGAGGMAATAAAGAAATTTTTGTT
ACTGTTAGAGTAGAGGAGMCTTCGCATTTTCGACGTTCTCAATATGATGT
CCATACAGATGCTTCCATATCCATTGGTCAGGCACTTTTAGGTGGAATTC
TGCGAGTCAAAGGACTATATAGTGATTTAAATGTTCGTATACCTTCAGGC
ACAAGCTCTCATTCAACTCTGAGATTAGAGGGAAAGGGTATTAAAAAACT
GGATACATTTGGTGGATATGGAACCCATTTCGTTCATTTAAAGATTGATG
TTCCTCAGTATATTTCTCAAGAGCAAAAAGATTTGATTTATCGTTTTGCT
ACTTTGGATGAAAATACGCCTGAATGGTCTGTAACTGGGCTGAAGGATTT
TAAATCAAAAAAGAAAGATAGTAGTAGCGATTTAGAAGAAACGGAGAGCC
TTGGTTTCTTTGCCAAATTGAAGAAAAAAATATTAGGATAA
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