EMLSAT00000005848, EMLSAT00000005848-701695 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005848
Unique NameEMLSAT00000005848-701695
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3178supercontigLSalAtl2s3178:45745..46683 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005848 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005848EMLSAG00000005848-688614Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025547EMLSAE00000025547-734475Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770534auto770534Lepeophtheirus salmonispolypeptide
EMLSAP00000005848EMLSAP00000005848Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005848

>EMLSAP00000005848 ID=EMLSAP00000005848|Name=EMLSAP00000005848|organism=Lepeophtheirus salmonis|type=polypeptide|length=312bp
MNKTVMDNGKKILAGKFENEFKVNFNGGRVGALLDISQSPSELLCDMKKK
VKLHIFKKGDPFFRTKQLDQFFRSTPFLSNKTYNSCAVVTNSGSLINSGL
GTFIDSHDLIIRFNDGPTSGFEKDVGSKTSLRVVNSQIIFKPEFGFLGPK
SLYSSSAVLVWDPTSYTANISEWYSHPDQPFFENFFAKRRMKPEEPLYLL
HPGSLWSIWDWLQSHSKWPMVPHPTTSGFLGLAIAIQHCRIVRSFEYIPS
LRYGNRCHYYGTQIYPGDPCTYGAWHPVSTEKLMALALNIGKKKEIYSDG
FLTITGFAGLKC
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mRNA from alignment at LSalAtl2s3178:45745..46683+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005848-701695 ID=EMLSAT00000005848-701695|Name=EMLSAT00000005848|organism=Lepeophtheirus salmonis|type=mRNA|length=939bp|location=Sequence derived from alignment at LSalAtl2s3178:45745..46683+ (Lepeophtheirus salmonis)
ATGAATAAAACCGTTATGGATAATGGAAAGAAGATCCTTGCTGGAAAATT
TGAAAATGAATTTAAAGTCAACTTCAATGGTGGTCGGGTGGGAGCATTGC
TAGACATCAGCCAGTCCCCATCAGAGCTTCTCTGTGATATGAAAAAAAAA
GTCAAGTTGCATATCTTTAAAAAAGGTGATCCTTTTTTTAGAACTAAGCA
ATTAGATCAATTCTTCAGGTCCACTCCTTTTCTTAGTAACAAAACATACA
ACAGCTGTGCTGTAGTGACAAATTCTGGTTCTTTGATTAACTCTGGACTT
GGAACCTTCATTGACAGCCATGATTTAATAATACGCTTTAACGATGGTCC
TACATCTGGATTCGAAAAAGACGTAGGTTCGAAAACTTCTCTTCGTGTCG
TCAATAGCCAAATTATATTTAAGCCCGAATTCGGGTTTCTGGGTCCTAAA
AGCCTATATTCCTCCTCTGCAGTACTCGTTTGGGACCCAACTAGTTATAC
GGCTAATATTTCAGAGTGGTACTCACATCCAGATCAGCCTTTTTTTGAGA
ATTTTTTTGCAAAGCGACGCATGAAACCAGAGGAACCTTTGTATCTTTTA
CATCCAGGAAGTCTATGGTCCATTTGGGACTGGCTACAATCTCATTCAAA
ATGGCCGATGGTTCCACATCCGACGACTTCTGGCTTTTTGGGATTAGCTA
TTGCAATCCAACATTGCAGAATTGTTAGGAGTTTTGAATATATTCCATCC
CTCCGCTATGGTAATAGATGCCATTACTATGGAACTCAAATATATCCTGG
TGACCCATGTACCTACGGAGCCTGGCATCCTGTTTCTACTGAAAAGTTAA
TGGCGTTGGCTCTCAACATAGGAAAAAAGAAAGAAATTTACTCAGATGGG
TTTTTAACTATTACAGGATTTGCAGGGCTTAAATGTTAA
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