EMLSAT00000005853, EMLSAT00000005853-701700 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005853
Unique NameEMLSAT00000005853-701700
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s317supercontigLSalAtl2s317:196616..199534 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005853 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005853EMLSAG00000005853-688619Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025560EMLSAE00000025560-734488Lepeophtheirus salmonisexon
EMLSAE00000025561EMLSAE00000025561-734489Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774338auto774338Lepeophtheirus salmonispolypeptide
EMLSAP00000005853EMLSAP00000005853Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005853

>EMLSAP00000005853 ID=EMLSAP00000005853|Name=EMLSAP00000005853|organism=Lepeophtheirus salmonis|type=polypeptide|length=362bp
MKNRAMSSSILQMFLFWIAVSSSFGDIIGGGRHRHSHNSHRTLRKGRQNG
GRGSASQGLAIDFTGCVNDPSTGFCCIEKEEPFTSLQKDPILECTHKNVE
KCHYTYVTQFTPSQEEVCEENFEKTCQVTFKQQAFNDTIRKCYKPLEKIC
NGQGPEECKTVYESSCTTKYVEKKPGKYVGDTKCEKLPIEICGAGCVTSE
GPEECHNKVITSLIDVPEEVCDLNPQKTCRFQTKLVPKLSPKHECTVFPQ
EICHLKFSQAAPVTKTLRTKWCQDPTPPSPGESYEENENTPPLITTIDGA
ENNVNXVELPTYVTEPPPTPPPALYGAPPRSPRQQFSLGDIGLLPPPPSS
SKSRFVRSSITA
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mRNA from alignment at LSalAtl2s317:196616..199534-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005853-701700 ID=EMLSAT00000005853-701700|Name=EMLSAT00000005853|organism=Lepeophtheirus salmonis|type=mRNA|length=2919bp|location=Sequence derived from alignment at LSalAtl2s317:196616..199534- (Lepeophtheirus salmonis)
ATGAAAAATAGAGCCATGTCTTCGTCGATTTTACAAGTAAGCGTCTTAAA
TTATAATTATAGAATTTAAAACTTGGGAAGGAACGGTTTATTTAGTTAGT
AGTGAGGGTATGAAGTATTTAGACCCCTTTATTAATTAGCTACATATATG
TAAGCAAGCACCTGATTATTTAATATCATTTTTCCTTCTTCTTCTTTTTT
GTATATTTTTGACCCTCTCAATAGCAAGCAAAAAAAAAATAATACACAAA
CTGAAATCAAATCTTGTAATCCTTGAAAAAATAAAATAGGGGGGGACGAG
TCTCAAAACAAACTTACCACTGGCGCTCATTGCACAAAAGTTGCAATGAC
CTTCATGCCACTACTAACATAGCAGACCACAAGGAAAGAGGATGATGATG
CTTAAATAACAATGGATAAGAAATGATTATTCCATGGGTCAAAATTTGTT
GTTTTACAAAAAAGAAAAAAAGGAATTTTTTTTCTCTGTGCCATTTTTTT
TTTTTTTTGTCAAATCCTTTTAGGAATGCTACTTTGTGGCTTTMAACCCC
CCCCCCCCCTCTATCTATTCTACTTCCCTTCTTAGTATGTTGGGATAAAA
CAAAGTTGACTACTAACTTGTTCACCTCGACGACGCCTCGACAGATGTCT
CAATTCTACTATCTTACATAGAAGTAGAACGATCATCACAATTGTAACAC
TATCAAATCAAATAACTGAGCGGAGAGTTGAAAGAAAATTCCTCCAAAGA
TTTTCAGACCTCATATAACTTTGTCCCAAATTATAATCCGGAAAATTATG
ACCTTAGGATGGAATTATATTCTCATGGAATGGACTAAAAAATTAAGTTG
ACTCTTTTTTCAACCCATCATTCCATTTTTTTAAACCTCATATGGGAATA
CAAATCCTGCATGATTTTTTCAGATCTCGTCTTTTACTACTTGCAGTGTT
GTTCTAAAAGGATGTCCTCACAGCATTATATGTTGGTAGATTATTGTAGC
AATGAGAGTAATTTGCAACAGAAATAGCTAAGACATATATCTACATACGT
AATTAAAAAAACAAATTCTCACAGTCACAACAATTACATGCATAATTTTT
GTTTAATTAAATGCGTGTTAAAATAAAACTGATATACTATTGAGATAGTC
ATTTAACTTGGAATGGAAATGATTTGTATCTAAATGGGAAAAAAGCCAAG
AAGTTTTGTATGAGATTTGATGTGTGTGTGTTTTTTTGTTTGTTTATTGT
ATTGCAGGTCTATATAAATTGCAGTGGAAAACTATTTGTGATAGTTGTTT
ATGAGTATTTTTCGTATGGATTTTTCTTCTGACCATTTTATTGTAATAGT
TTTCATTACTTCTTTTTTGAATAATTAACAATAGGGGAAAACAAATCGAC
AATAATTCCAAAATTAATAAACAAGCCCATAGATTTGACCTTTCCTGTAT
TGTTTTATCATTATAGGCGGATGAATGTATTTCCTTTTTTAGAGAGTGCC
CTTTTCAGAACACACTTGGTGTACATATGTACAAATAGATAAAATAATCT
ACAATTTTCAACTCCTTCAAAAGAAAGGATGTTATTTTTGTTTACATAAT
GAGACTCTAACTAATAACATGTAATTATTTATTCAGTAATCGTATGTGAT
TCATTTATTAGAAACATGCGATTGAGCAAGGACGGTTACATTATAATTAT
TGTCATAGTCCTATGTTTTCCATTCCCCTTCTTGTTATAATTACTGTTAA
TATTATAGACATATAAGTATATATAAACAAACATATAATAATTATCTTAG
TTTGAAGGTTACACATGGATTTGTATCCACTCATTACATAATACTTGTTT
TCTTCTTTTTTTTCAGATGTTCTTATTTTGGATAGCAGTCTCTTCATCTT
TTGGAGACATTATTGGGGGTGGTCGACATAGACATTCTCACAACTCCCAT
AGAACTCTTCGTAAAGGACGCCAAAATGGTGGAAGAGGATCTGCTAGTCA
AGGCTTGGCTATTGATTTTACTGGATGTGTCAACGATCCGTCAACTGGAT
TCTGCTGCATTGAAAAGGAAGAACCATTTACTTCCCTTCAAAAGGATCCC
ATTCTAGAATGCACTCATAAAAATGTGGAAAAGTGCCATTACACCTACGT
AACACAATTCACTCCCTCCCAAGAGGAGGTATGTGAAGAGAACTTTGAAA
AGACTTGTCAAGTTACATTTAAACAACAGGCTTTTAATGATACTATTCGT
AAATGCTATAAGCCTCTCGAAAAAATCTGCAACGGCCAAGGGCCTGAGGA
GTGCAAGACTGTTTATGAATCTTCCTGCACGACCAAGTACGTGGAAAAGA
AGCCAGGAAAATATGTAGGAGATACAAAGTGTGAAAAACTTCCTATTGAG
ATCTGTGGAGCGGGTTGCGTGACATCTGAAGGACCGGAAGAATGTCATAA
CAAGGTAATTACATCCCTCATTGACGTTCCAGAAGAGGTTTGTGACTTGA
ATCCCCAAAAAACATGTCGTTTTCAAACAAAGCTAGTTCCCAAGTTGAGT
CCTAAGCATGAATGCACTGTTTTTCCACAAGAGATTTGCCATCTCAAATT
TTCTCAGGCAGCACCCGTTACCAAAACTCTCAGAACCAAATGGTGTCAAG
ACCCTACTCCTCCTAGTCCGGGCGAGTCATACGAAGAGAACGAAAATACT
CCTCCACTCATCACAACCATTGATGGTGCGGAAAATAATGTGAATKCCGT
TGAGCTCCCTACATACGTCACGGAGCCTCCACCCACTCCTCCTCCAGCCC
TCTATGGAGCTCCTCCAAGAAGTCCTAGGCAACAATTCTCATTAGGCGAC
ATTGGTCTCCTTCCACCACCTCCATCCTCTTCTAAAAGTCGCTTTGTTAG
AAGCTCAATCACTGCTTAA
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