EMLSAT00000005857, EMLSAT00000005857-701704 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005857
Unique Name	EMLSAT00000005857-701704
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s317	supercontig	LSalAtl2s317:354879..359884 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005857 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005857	EMLSAG00000005857-688623	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000025582	EMLSAE00000025582-734510	Lepeophtheirus salmonis	exon
EMLSAE00000025583	EMLSAE00000025583-734511	Lepeophtheirus salmonis	exon
EMLSAE00000025584	EMLSAE00000025584-734512	Lepeophtheirus salmonis	exon
EMLSAE00000025585	EMLSAE00000025585-734513	Lepeophtheirus salmonis	exon
EMLSAE00000025586	EMLSAE00000025586-734514	Lepeophtheirus salmonis	exon
EMLSAE00000025587	EMLSAE00000025587-734515	Lepeophtheirus salmonis	exon
EMLSAE00000025588	EMLSAE00000025588-734516	Lepeophtheirus salmonis	exon
EMLSAE00000025589	EMLSAE00000025589-734517	Lepeophtheirus salmonis	exon
EMLSAE00000025590	EMLSAE00000025590-734518	Lepeophtheirus salmonis	exon
EMLSAE00000025591	EMLSAE00000025591-734519	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776785	auto776785	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005857	EMLSAP00000005857	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s317:354879..359884+

protein sequence of EMLSAP00000005857

>EMLSAP00000005857 ID=EMLSAP00000005857|Name=EMLSAP00000005857|organism=Lepeophtheirus salmonis|type=polypeptide|length=498bp
MDDIKCQGIVSGHHQDCDMDCVETMTLENSLSHKGNSVITKCDQLSKGNV
KGQILVCAICNLLSLMQGCVVLMSSTILPQIQTDDPKKLSNRGDLVITID
QGSWFASLFCVGYVIGALFGGIQSDFIGRRKSLMIDCLTAFTGAVVIALA
NSFSILLIGRYLGGHACGSGLVSLPAYNSEISHPSLRGTLSGMLVLLYYI
GTCLMTTLGALFPWRYAVGFSCIIPILNIVGLYFSPESPVWLIRFGYKDR
ATRSLIYLRGSRVEAEKEIKILEEGFSKEETRKFLSVFDGVFEPSFRKPI
LFLMYMVPINLKLPIDAYIAAAFLSYYRLCFGFASLYGMFKIRRRVMALG
CLSFMVLGNATTALYQYLLYQGVWTDWGLENNKFINWFPIFPIMMLYGAM
AFGFGPSIKALQGELLPSKKRSFGGSILGVFDGISLFVVTKATPTLLYYL
KLHGCFTLFACILLSGLIATYFFMPETQGKHLSEIEKFYGRIEKDGIT

mRNA from alignment at LSalAtl2s317:354879..359884+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005857-701704 ID=EMLSAT00000005857-701704|Name=EMLSAT00000005857|organism=Lepeophtheirus salmonis|type=mRNA|length=5006bp|location=Sequence derived from alignment at LSalAtl2s317:354879..359884+ (Lepeophtheirus salmonis)
CTACTCAGACATATAATTTTACTATTTCTAAACTCAGTCGTCCGTAACTC
TCTAAGGAATCATTCATATGTTTGATCTTGAAAAGATAATTATTTTAATT
TAAAAACCTGTGGATCAAGTGTCTCTCACTTCAATAAAATGGGTATAAAA
ATTTATTATTCTACAACCATAGCTTTTAATTTATATATTTGTTTTTTCAT
TTAAAACTAAACTAGATGACATCAAATGTCAAGGAATTGTCAGTGGTCAT
CATCAAGGTAAGTGATATAGAAAACTCCATGCCTAAACTCAATATTGTTA
CACAATAGATTGTGATATGGACTGTGTAGAGACCATGACTTTGGAGAATA
GTTTGAGTCATAAAGGTAACTCTGTTATCACAAAATGCGACCAATTATCG
AAGGGAAACGTTAAAGGACAAATCTTAGTTTGTGCTATATGCAATTTACT
CTCATTGATGCAAGGCTGTGTGGTGCTCATGTCCTCCACTATTCTACCTC
AAATTCAAACTGATGACCCTAAAAAGTTATCGAATAGAGGGGATTTGGTC
ATCACTATTGATCAAGGTTCATGGTTTGGTAATGTACATAATTTTATTTT
ATACTTTTAATATGTATTCAACTCATGGGTGCAGTTGGGTGTGGGTAAAG
AAAGGGAATCTTACTCCCCTCAGATTTTCTATGACCCCAAAACGCCCCTC
TCCCTCCTAGGCTTACAACATTTATCGAGTGAAATCCGTGGATGATCCCT
CCAATCCCCCATTCAAAAATAATATAACTATATAAGACTGATATAACTAC
AATATAACTTGCTATAACTATTCAAGTAGCAACAGTTAAATTAATGAGCA
TGAATTATGCAAGGTCATTTTTTAAATTGAAGTGCCTACATTTTAAAATA
ACTTAGCAATATCATTCACCCAAGCTTTTTTTTTTGTTTCTCTTTATTTT
AGAATATAATATTATCTTTAGACGACTAGCTTTTAAAAGATGTCTGAGGG
CCATTAATCTACACAATAATAACAATCAATCAGTTTCGGATATTAATGCT
TCTTTTACTTTATAGCAAGTCTTTTTTGTGTCGGKTACGTAATTGGAGCA
TTATTTGGTGGAATTCAAAGCGACTTCATTGGTCGAAGAAAGTCATTAAT
GATTGATTGTCTTACAGCTTTTACTGGTGCAGTTGTGATAGCTCTGGCAA
ATTCATTTTCTATTTTACTTATTGGAAGATATCTAGGTGATTTCAATACA
TCTTTTAAAATAAAAAAAATCTGCAAAGTCATTATTTCTGCCATTTAGGA
GGTCATGCTTGTGGCTCAGGTCTTGTTTCACTTCCTGCATATAACAGCGA
AATAAGTCATCCAAGTTTGAGGGGTACTCTTTCAGGGATGCTTGTATTGC
TTTACTATATAGGAACATGCTTAATGACAACGTTGGGGGCTCTATTTCCT
TGGAGATATGCTGTAGGTAATATGTTACTAAGAAACGTAATCTAGGTAGG
TAGATAATCAATACTTTTATTCAAGGTTTTAGTTGTATAATTCCAATTTT
GAATATTGTTGGATTATATTTCAGTCCGGAGTCTCCTGTATGGCTAATAA
GATTTGGATACAAGGATAGGGCGACAAGAAGTCTGATTTATTTGAGAGGA
TCCAGAGTAGAGGCCGAGAAGGAAATCAAAATTCTGGAAGAAGGTTTTTC
TAAAGAGGAAACCGTTATAACGCTCAATGGCTATGTTGTTAAGTATATAC
TATTAAGTAATACAGTATTTACTGCATATGATACATGGGCTGAAAAACTC
CGGTCTAAACAAAGGAAATACGTTTTTTTTTCGCTCAAAATGGTGTGTTT
TTTTAAAATTATTTTTATTTTTATTCGCTTTATGGAACGCAGTCCCCATA
ACAATTTTCTAGTCATTGCTTAGCTTAAACGTTATTATTTCCCATCAAGA
GCATTGTAAATTTAAAACAATTTTTTTTTTTTTATCCATTGTTTTAGAAA
TAACCAAAGTAGCGTCATACTTAGCACAATAACTTACATATTGAAAAACA
GATTGACTTGAAATTTTGACTGCTATCTTTTTAAGGTTGGTACTAACTGA
AAATGAGGCGAATAAAAAATAGCGCAATCTATGTTTGAAGCGCGGGACTT
TTTATCCAATGTGTTATGTATATTTGTCAATATTAGATTTTGGTTTCTTT
CACTGTTTAGGTCCTATCTAAAATCTCTGATTAACATTTTATTTATTATA
GAGGAAATTTTTAAGTGTGTTTGATGGAGTTTTTGAGCCTTCCTTTAGAA
AACCCATTCTATTTTTGATGTATATGGTTCCTATTGTAAGTGCATGGTCA
GGTCTTGCATTTATAACATTCTATCTGGTCACATTTTTAGAAGCAAGTTT
GCAATTTAGATTTGTGTAGGAATAGTCCATTTTAATTATTAAATTTTACA
TTTTTCTTCGTAGAATCTCAAACTCCCAATCGATGCATATATAGCAGCCG
CCTTTTTATCCTATTATCGCTTATGTTTTGGCTTTGCTTCACTCTATGGA
ATGTTTAAAATACGAAGAAGAGTTATGGCTCTTGGATGTTTGTCCTTCAT
GGTACTTGGAAATGCTACGACCGCTCTTTATCAATATTTACTTTATCAGG
TTCATAATGATCTTCTTTTTATTCCATATTTTTAAAAAAATGGAATATTT
TATGAGGAGGAACGTTCTTATAGAGTTATTAATGACTGTCAAAAAGTGCT
CACGTGTTTTATTTTGCACTGGTTTTGAATTGAAGTTTATATGTGAATGC
TTCAAACAAGGCCAATTATGACTCTATGCAATTGTCATGCATTGTATTTT
CCTTTTAGATGCTAACATACCTGTATATGAGTATATTTATCCATATATAG
TCCTCTAAGAATGAAACAAAATCCTTCAAGATTAATGTTAAAAACTTACT
TCATATTTGGTGTAGCAAGGTAGTTTCTATAAGTCTTTTCACCACTCTTT
CTAACTCTGAGTGGATCCCAGTTTGCTCTTAGCAGCTTAAATTTGTCATT
TTGAATTGAATAACTTACATACACACATAGATGTTTACAATGACGTTAGT
CACGTTATTATGTTTATTAAATCTGGCAAACTTCCCCCCAAAAAACAAGA
CCCAATGGCAGTTGGTAGTTAGCCACTTATTACCAACTTTGAAGTTATTA
TTTAATAATTGTTACCTCGGAATTGTTGAGGGCTTAAGAGGAGCTAATTG
TAATGCAACCAATCAGCGTTCAATACACTAATAGAGAGACAAGTAGTAAA
AGTCGATAGATGTATGACAAGAAAATACAATAAAATATATTTATTGTAAA
GGGGGTAATTTTGTTCAATAATTTACTTGTTGAATACTAAAGGAAGTAAC
CGGCATTAGTTGGATATATTACAAATCGACAAACAGACAGACAAAGTTTA
ATTTAATAGTAAAAATATGTACTCCTCTTTTCTTTTTTAATATGACGCGC
TGGGCTTTACCTACACGCTCGTTATTATATTATTATTTCTTGGATAAAGT
ATTCACCTACTTTTAAGATATTAAGCGTAAACTCATAAATGAGATGTGGA
AAGATCAAAAAACTTTGTTTTATGAATATATATTGTTTTCTAAAATAAGT
GACAAATCAGTTTTCAGGCTTTAGTTCATCTAAATATATATAAAAATGTT
GCATGAATCGTATTATTCATTATCGCAGTGTTTCTGAACATTTTACCCTT
ATTAACCAATTTTAGAATATTAAAAGCCCCCAATTTTTTTAAAGTTAATA
AAAGATTTTGAATTGTGCTATCAAAAGAACTTGAAAACCTAAAAAAAAAG
AGGCTGAATGGTGATTTTTTTTCATACAAAAATCAGAAATTATTTACTTT
GTTTAACTAGCTAGTGTTGTATTGGTCCTTATTTAGGACTAAAAACTACA
GTACCGTCCAGTTTTGTCTTGGTGCAGCCCAATTCTCTTCTAAAACTGTT
AAAGTTCGGTCCTTGATGACAAATTTCAACTTTATTTCTTAAGACTGTAG
AGGACACAATAAATAAGGAGAGACACAACACCATAGCTTGCTGATACCTT
TTCAATGACATATTGTACTTGCTCATCATTGCTTTGGTTAACAATATATC
ACAAATCAAAAATTTATTAAAATACTAATTCCTTCATCCGTAACACCTCA
AAACTCAGAGCTGTATTGAGTTACATATCCAACATTTTAATTTTTAGTAG
GACTACTAACAAAAGTACCACTTGCCAAATTTGAGTCTTTGAAAATGTTT
AAAAATTTCGTGGAATGACCCATATAAAAAGTCATTAATAATGAACTTTT
TAAAACATAATCTAATTTACACATTAAGAATATTTACTTTGAGCAAATAA
TCTCATTTAAATTATTGTGTAATAAAAAAAAATGTGTATCCATGTGGGTT
TTTTTTCAGGGAGTTTGGACTGATTGGGGTCTTGAGAATAATAAATTTAT
TAATTGGTTTCCTATATTCCCAATCATGATGCTTTATGGCGCAATGGCTT
TTGGATTTGGGCCATCAATTAAGGCCCTTCAAGGTGAGCTTCTGCCATCA
AAGAAAAGAAGCTTTGGCGGTAGCATACTTGGAGTTTTTGATGGAATTTC
CTTATTTGTCGTTACAAAAGCTGTAAGGTTCATTTACATATTTATAGTGA
AATTTGACCATACAAATTTTATCCTTATTTCTTAGACTCCAACCCTACTT
TATTATCTGAAGCTTCATGGTTGTTTTACTCTATTTGCTTGTATTCTCTT
ATCTGGTCTGATTGCAACTTACTTTTTCATGCCAGAAACACAAGGAAAGC
ATTTAAGTGAAATTGAAAAGTTTTATGGAAGGATCGAAAAAGATGGCATC
ACTTGAGTAATATGCATATTAATTTTCATTGGATCAATCCTCCTTGAGAT
ATTCTTCCATTATAATAGTCATTGTTTAATTTATTTTTTCTTTATAAATA
AATACA

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