EMLSAT00000005864, EMLSAT00000005864-701711 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005864
Unique NameEMLSAT00000005864-701711
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s317supercontigLSalAtl2s317:796700..797727 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005864 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005864EMLSAG00000005864-688630Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025631EMLSAE00000025631-734559Lepeophtheirus salmonisexon
EMLSAE00000025632EMLSAE00000025632-734560Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779754auto779754Lepeophtheirus salmonispolypeptide
EMLSAP00000005864EMLSAP00000005864Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005864

>EMLSAP00000005864 ID=EMLSAP00000005864|Name=EMLSAP00000005864|organism=Lepeophtheirus salmonis|type=polypeptide|length=319bp
MKKHLMVFLIISMIALSHADEIGHHAPSEGVDKSREGRQSPSSSEGVDFT
ACLTDIETGLCCIEKEESISSIQKDPVLECTHKNVEKCHYTYVTQFAPSQ
EEICEENFEKKCQITFKLQAFNETVQKCXKPLEKVCNGQGPEECRTLYES
SCSTKYVEKQPGKFVGDTSCEKLPIEICGAGCVTEEGPEECHDKVITSFI
DIPEEICDLNPQKICRFETKLVPRLRPAHECTTIPQETCNLKFTSPQRVD
KKIKTKWCLDDTPAVPGETYDESNSLGAPIGGALSTNNIVQTPITTSSNI
GNAFDDQSLILSPIGAFNA
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mRNA from alignment at LSalAtl2s317:796700..797727-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005864-701711 ID=EMLSAT00000005864-701711|Name=EMLSAT00000005864|organism=Lepeophtheirus salmonis|type=mRNA|length=1028bp|location=Sequence derived from alignment at LSalAtl2s317:796700..797727- (Lepeophtheirus salmonis)
ATGAAGAAACATTTAATGGTAAGCAAAGTAATTTTCTTGCTATAGATTCA
TATCTTTAACTTCAATCTTTTTTTTTTCATAACTAGGTTTTCCTTATCAT
ATCCATGATAGCCTTGTCTCATGCCGACGAGATTGGACATCATGCCCCTA
GTGAAGGTGTAGATAAATCAAGGGAAGGACGACAATCCCCATCTTCATCC
GAAGGAGTTGACTTTACAGCATGTTTAACTGATATTGAAACGGGATTATG
CTGTATTGAAAAAGAGGAATCCATTTCCAGTATTCAAAAGGATCCAGTTC
TAGAGTGTACTCACAAAAATGTGGAAAAGTGTCACTATACTTATGTCACA
CAGTTTGCTCCCTCACAAGAAGAAATTTGCGAAGAAAACTTTGAAAAGAA
ATGTCAAATCACTTTCAAACTACAAGCATTCAATGAGACAGTACAAAAAT
GCTAKAAGCCTCTCGAAAAGGTTTGTAATGGACAAGGACCTGAAGAGTGT
CGTACACTCTATGAGTCCTCATGTAGCACCAAATACGTTGAAAAGCAACC
CGGTAAGTTTGTTGGGGATACAAGCTGTGAAAAGCTTCCGATTGAGATAT
GTGGTGCTGGTTGCGTCACGGAAGAAGGTCCAGAAGAATGCCATGATAAA
GTCATCACCTCTTTTATTGATATTCCTGAAGAAATTTGTGATTTGAATCC
CCAAAAAATCTGTCGGTTTGAAACTAAGCTTGTTCCTCGCCTCAGACCCG
CTCATGAGTGTACCACAATTCCTCAAGAGACCTGCAACTTGAAATTCACT
TCTCCACAAAGAGTTGACAAGAAAATTAAAACCAAATGGTGCTTAGATGA
TACTCCTGCAGTACCAGGTGAGACCTACGACGAGAGTAATTCACTTGGCG
CTCCCATAGGTGGGGCATTAAGCACCAATAATATTGTTCAAACTCCTATT
ACTACATCTTCTAACATTGGAAATGCATTTGATGATCAGAGCCTTATACT
CTCACCTATCGGGGCATTTAATGCCTAA
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