EMLSAT00000005879, EMLSAT00000005879-701726 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005879
Unique NameEMLSAT00000005879-701726
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s318supercontigLSalAtl2s318:522663..523631 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005879 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005879EMLSAG00000005879-688645Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025688EMLSAE00000025688-734616Lepeophtheirus salmonisexon
EMLSAE00000025689EMLSAE00000025689-734617Lepeophtheirus salmonisexon
EMLSAE00000025690EMLSAE00000025690-734618Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778368auto778368Lepeophtheirus salmonispolypeptide
EMLSAP00000005879EMLSAP00000005879Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005879

>EMLSAP00000005879 ID=EMLSAP00000005879|Name=EMLSAP00000005879|organism=Lepeophtheirus salmonis|type=polypeptide|length=174bp
MTDLLSQEEMDAMGLDTEQVHVLKRCFDGFADEDGAIPADNVGNILSMMG
LKVKPASLKDIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKE
AFRIYDKEGNGYISTETLREILRELDNKLTSDDIDGIIEEVDEDGSGTLD
FDGEYYCILQFNYSMAQRRVYSDP
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mRNA from alignment at LSalAtl2s318:522663..523631-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005879-701726 ID=EMLSAT00000005879-701726|Name=EMLSAT00000005879|organism=Lepeophtheirus salmonis|type=mRNA|length=969bp|location=Sequence derived from alignment at LSalAtl2s318:522663..523631- (Lepeophtheirus salmonis)
ATGACAGACTTACTCAGCCAAGAAGAAATGGTAAGGCTAAGTAGTTTTAG
TATATATATACATTCTCCTTTTGAAAGCATAGATGCCAAGTACCTATGTT
TAGTAGCACATCTTAATCAAATATATGAACTTGTCATAGTTTAAAATATA
CATATAATATATGCATAGAATGAAAGAAACAAGGTAAGGGTTTAATTATG
CATTACATTGTGCAGGAGGAATATGATTCTGGGAGTGCTTTTCATGCATA
GAATGAATATATATGTACATATTCATCTCTAATGTTTATGATGCAGAATA
TTTAAATATCACACATTATTTACTGCTCTTGTAAAATAACTCAAAAAAGC
AAATCTTCACGGACATTATTTAATTCGTATCTACAATATGATATATAATT
GTATTATATCTTTCTTAGGACGCAATGGGCTTGGACACCGAACAAGTTCA
CGTCCTCAAAAGATGCTTTGATGGTTTCGCTGATGAAGATGGAGCTATTC
CTGCTGATAATGTAGGGAACATTCTGAGTATGATGGGGCTTAAAGTTAAG
CCGGCATCGCTGAAAGATATTATAGAAGAAATTGACGAAGACGGTAAGGG
GTCTGTAGCGCTTTATTTTTTCTATTAATTAAATATATCTAATTTAAAGG
GTCGGGTCTTCTTGAATTTGGGGAGTTTTGTCAGTTATCTGCGAGGTTTC
TCATTGAAGAAGATGAAGAAGCGCTTAAAAAAGAGCTCAAAGAGGCATTT
CGGATATACGATAAAGAAGGGAATGGATACATCTCTACAGAAACTCTTCG
GGAAATCCTTCGTGAATTAGACAATAAACTTACATCCGACGATATCGATG
GAATTATTGAGGAAGTTGATGAGGACGGATCTGGCACATTAGATTTTGAT
GGTGAATATTACTGTATATTACAATTTAACTATTCAATGGCGCAAAGGAG
AGTATATAGTGATCCTTAG
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