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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s31 | supercontig | LSalAtl2s31:1313398..1318944 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005910 >EMLSAP00000005910 ID=EMLSAP00000005910|Name=EMLSAP00000005910|organism=Lepeophtheirus salmonis|type=polypeptide|length=324bp
MDNTRTLRLPNDHIETPKSSFLGFNSFPLDGHSMQVIFELYTRRNPEDPM
YLSFNDSSKITSSTFDVKKETKMFTHGFTGRCDKGNFNVICVDWRKDADS
SYRSAAANTQMVGTIIAMFFEMVENQFEPIHQRSHLIGHSIGAHAMGYAG
FRKSGIKRITGLDPAGLAFDGVSSDLKLDPSDASFVDVIHTNGQSVFQGG
FGTLERMGHVDFYPNGGDTQPGCTNAILSLLNIFNLSSEEKRRTFKCNHE
RSVKIFTESIYSSCQFLGKRCHNWESYLEGNCSDQNAIAFGYNSENISAP
DGKYYFATGSHVPLCCKTYNRLYT back to topmRNA from alignment at LSalAtl2s31:1313398..1318944+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005910-701757 ID=EMLSAT00000005910-701757|Name=EMLSAT00000005910|organism=Lepeophtheirus salmonis|type=mRNA|length=5547bp|location=Sequence derived from alignment at LSalAtl2s31:1313398..1318944+ (Lepeophtheirus salmonis)
GAGGAACAAATCAAAAAAACGTCTTGTTGTAAGTATGGGCCAAAAATTTA
AATAAATTACAACAAAACTATTATATTTTTAACTATACAGAAATAACGGT
ATCCTAATGGATAATACAAGGACACTTCGTTTGCCCAATGATCACATTGA
GACACCTAAGTCAAGGTAATTTCACTATAAGCTACATTTTTGTTTCTTTA
ATATGTACTAAGTTCCCTTGAACCATTAATTATTATAAGAATATACAACA
GCATTTTCGCCCGCTGGCGAAAGCCCAAATTTATTATTGTTAATTAAGCC
TTACAACACGAAAATAACCTTTAAAATTTCCATTGGAATAGGTTTGCGAT
TTAAAGGTTTATTTTTAAAAAACAGATTGTTGAGTATAATTTCAATTCAG
TGTCCTATTTGGAAATCAAATAACCATATACATGCAAATTTCAATGCCAA
TTGAATAAAATAATTCCAACTTTCGAAAGCTAAAATATTTATTAAGTATC
TTGAACATAGTTCCTACAAATTGTGTCTAATCCTGAAGGATAGTCTATGG
AAGCTAATATTTGTTTCTATTTGCTCTATACTATAATTAAAACTAAAGAA
TGAACTTATATTAGTTTGATTGGCTTTTTTTTTTTAGTTTAACTTTTAAT
TTTCTTATAGAATATTTAATATATACATATATATGTAAGGTTGCATAAAA
ATGTTTCCAAATTAAATATGATTTAATTTAACCCTTGAAGTCATTAAAAG
AAGTAATGAATAGATTAGAGGAAGGAAAAGTTCAGAAATTAAAGTAAGTA
GGTCGATTAAATGACTCAATATGTGATGAATACTAATCAAATACATAGAT
TGTCTGAGTTTTTTGGCAATTTTTTGAAGTTTGGATTCTTGTTATTAAAA
AAAAAAGCGGAATACTTGGCTTAAATAGGATAATAGTAACACTTCTTTTA
AAGCATTGCAATAAAGCGAAAAATACGAAATAACTTTTTTCTCAACCGAT
AATAAGAATTTAAAAAGATTTTCCATCAAAAAAATGTTTGATTTTAATGG
TTTTTTTTCAGTAATTCTTTTTTCTAAAATATTTAACAAATAAACAATGT
AAATTTGCGTAACAATGAATTGAAATAAAGTAGGTATACTTAGGTGAATT
ATTGGACTGATTGTAATCTACATAAACTACTTCATCTACTTCAATCATGC
TGTTCAGAATTTTAAGTTACATACGTAAGTCTAGGTCTAATTCTGATCAG
AATCTTAAGCTCTAGAAGGCAAGTTAGTTTTTACGTACATCATTTCGTTT
TTTTAAAGATTGATTATTTGTTTCACATTTTTTTTTTTTGGAAGTATCGG
TTGTTGATTCGTAAATGCACAAAAAAATTAAAAAACCGAAAAACAAATTA
TTATACACGAGGAAAAAGGTAGAACGTATATTATTTGTTCATCAAAATAT
GGATTTAGGAAGAAGTAATAGTACCGAGTTAATCTTGTTATGTATCTTCA
ATCTTCATTAAGGTTAAAGAAGGATCATGGGGAGTTAGCAAAGAAAATGA
TAATAAATACATAAATCTCAGGGTCAAACAAGTCAAAAAATTGAATTATA
TTTACCAAAATAAGTATTTTCACATGGTCAATTATATTTTGCATTTTCAA
GAGTGATGGTTTGATTATAATTACATCAAATGAACAAAAAACAATAAAAA
ATGTTGTTTAGAAGGAGTTTTTGCAATATAAATTTACTTATTATATATTA
ATAGTAGATCATTTTAATTTAGAATTTTAACATAAACAAACTAAATATTA
ATATCATCTTTTAATTTTTCATTGGCTATCTTTAAAATAGTTTGTTGAAG
GTAAAAACGCTCTCTTGAGCGTTAAATAACTACATCAAAATTTCAGGAAA
ATTCTTCATATAGTTTGGTTGTGATTCCCGGGCAAATGCCCAGAAACAGT
TACATTCGGATTTAGTATATACATAGATAGTCATTCCATTTTGATATATG
GCTTTGAATCGAGCTTATACTATAAAAACGTGATTTAAAAAAAGGCTTTT
AAGTTCACAAATTCAACCTTAATTTTCGCGTTATGTTGCTTAAATAATAA
AAATAAATTTGGGTTTCAGGTCGTGAGGGTTTTAAGACCTGAATTTTGTT
AACTAATGTAATTTTCCGGAATTTGTAGGTTTTTCTGGACTAAAGAGAAA
TGTTATCCAGACTTTGGTTGTTTKAAGCCAATAAGTTTTTTGGGATTCAA
TTCATTTCCATTGGACGGACACTCTATGCAAGTTATTTTTGAATTATATA
CTCGACGTAATCCAGAGGATCCAATGTATCTTTCCTTTAATGATTCCTCC
AAAATAACTTCATCTACATTTGATGTCAAAAAAGAGACTAAAATGTTCAC
ACATGGATTTACTGGGAGATGTGATAAGGTTTGGTGCAAGAGACTCATAG
AGGAGCTTCTAAAGAAAGTTAGAATATTCATAATGCTTATATACTGGGGT
TGTATCAATCTTAATATATGACCCTCAAATCAGTCTCGTCCTATTATAAG
TCTTTGAAAAACAACCCCAAAGGTTTCATTTATACTATAAGGTGGTATAA
ATAAATTAGAAAAATCTTGAAAGGCTTATAACGAACAAAATATTGTTATG
ATTTATTATTTGAAAGCTGCTTTTAATGCTATTAAAATATTCATAATGAC
ATCCAAGCTCTTCATAACCTCCGTAACAGAGCACCAGAAGGTTTAGCAGG
CCCGTGCGACTTTCTGCAGATCAATCTTTGGTATTGTACTGGATCTAGTT
TTGCACTTTTAATATACAATCCCTAAAATGCTTGGAGTAGCACTTGGAAT
AAATTAAAGCTTCCAATAAAACAGTGCAGCAGCCAACAAGCCCAAAAAAG
TGCAGGATGCCTTGGCCACAAAATGTTCTCACTTTTGAAACCCGGATTTG
TTGACCGTAAACAGCCTAGACCTGGGCCCATGCGATTTGTATCTCTGGGC
CAGTGTCAAGCATGAGGGCAATGGCTAGTATAATTCGGCTCTAGAAGGCC
TGAAGAATTCCATTGTACGTTCAATAGCAAAGTTGGTTTGCCTAAGGGTC
GCCCGGACCTACTGAAGCCTACGTCATGTGACTATTCTCATTTTAAAATC
CAATATTTTCACCTCTTAAATTGTAAAATTGTAAATTTACTATTCTCATT
TTGAAATGTGCTATTCCCATTTTGAATGTGACTATTCTCATTTTGAATTG
GATCATTCCATTTTGAACTGGACTCTTCCCATTTTGAATTTAATTTTTCT
TTTTTTGAATCAGAAATAGTATAAGAAATTCTCTTTATTTTTCATATTTG
TTTATACTGTTATGGTAATAACAATTCTATTTTTTTTTTTTGAACACCCT
CATGTACAAAGCACATAGCTACTAATTTTTGACTTTACTTTCCACTTCCC
AAGGGAAATTTTAATGTAATCTGTGTTGATTGGAGAAAAGATGCTGATTC
AAGTTACCGTAGTGCCGCTGCAAATACTCAAATGGTTGGCACAATAATCG
CCATGTTTTTTGAGATGGTGGAAAATCAGTTCGAGCCTATTCATCAAAGA
TCTCACTTGATTGGGCACAGTATTGGAGCTCATGCCATGGGTTATGCAGG
CTTCAGAAAATCCGGGATTAAGCGAATCACAGGATTGGATCCTGCTGGGC
TAGCTTTTGATGGAGTTTCATCCGACCTAAAGTTGGATCCCTCAGATGCA
TCTTTTGTTGATGTCATACATACTAATGGTCAGAGCGTCTTTCAAGGTGG
ATTTGGTACATTAGAAAGAATGGGTCATGTTGATTTTTACCCTAATGGAG
GGGATACGCAGCCTGGGTGTACCAATGCTATTCTTAGCCTACTCAACATA
TTTAATCGTGAGTAGAGTCAGATATGATTTGTGTAACGAACAGTGGCGCC
GTTAGCATTTTGAAACTGGGGTACCATACAAGGGTGTCCCTCAGAAGTAG
GGATCCATAATTGTGTTTGACTCGGTTTTGCAAAATAAATTAACTTTATC
ACACTTGTAAATGCTAGTGTACGCAACGATACATTTTAGGCAAAAGTTTA
AATCTCCCAAATTACAGTAAATTGTTTCACTTTTCCTGAAAGTTTTATTT
AATATTTCTTGCAATATTTGCAAAAATGAACCAGCTATCTAGGATTATTT
TTTCGACGACATTATTCTCCATAACTTTTTAGTTTTTGCATATAAGAAAA
AAATCTTGGTAGGTGAGTCTTTTTCTTTACTATTACAAGAAATGGTATTT
AATTTTTTTTTTGCAACGTGGGTGAAAAAAGTTTTTTGCTCGTTTCCTCA
CGAATTCTGATTTGGCAATTTATTGGTAAAAATAAAAGATGGACATCTCA
TATAGACAAATGTTTCACGCATATATGTTCGTATGTTGTTTATATCATAT
ATAAAATTAATTTATTATTATAAGGCTCGCCCGTACCGTAGGTGTCTAAA
CAAAAAGAAGAAATAATATTTACCATTGTCAATGTGATTTCCCGCTCCCT
CCTTGCTCTGAGCAAGGCTGGGTAGCACTTAGCTAGTAAATCAACAGAGT
TAAACAAGTTGATGCCATTTCCAAATCCATTTGCTACAAATAATTGTAAG
GGAAGACCCCATAGGATATCTTTTTTATAACAAATGCGCAGGGATAACTG
CAAACAGCTGTGATATGAAGCAAACAATCATTAATTCACTTTGTGTTTGA
CAAGGAAATAGTTACCTTTTTAGTTGAACCACAATTCTACTCTGAGACCA
ACGATACTTATATACTTATACTCCCCCAAACAATCCTTTGTGCGAATTTA
TGTCATTCATGATTTACACTCACTAGTGATTACTCTAAAATTAACTTAGA
GCTTCTCACTTCAAGAAGTAATGCTTCATGATAACTGTTTTTAAGAAGAA
TAAACAAACTACAAATTTTGTGTTGCAACTAAAAAGATCCTCACACGCGT
TTTATGTTATATTTTTACAATTRTAGTTWCGTTCCTACCCCCCCCCCCCT
CGCTAACGGMGTCGATAGAACCGAAGAATAAGTGCATACATATATTTTCT
AATACTTTCCTCTAGTTTCTAGCGAAGAAAAGAGGAGAACATTCAAATGT
AATCATGAAAGATCCGTTAAAATATTTACAGAAAGTATCTATAGTTCCTG
CCAATTTTTGGGAAAGCGTTGTCACAATTGGGAGAGTTATCTGGAAGGAA
ATTGTAGTGATCAAAATGCAATAGCGTTTGGATACAATTCAGAAAATATT
TCTGCTCCAGATGGAAAATATTATTTTGCTACAGGATCACATGTTCCACT
TTGTTGTAAAACTTATAATCGTCTGTACACGTAAGATAGAATGACGTATT
GTATTGTCACCTGTCAATATTTCAGCTTATTTTTTTTAATAATCAATGTT
CCGAACGTTTGATTTGCTGAAATATACCGAGTGTCTAATTAAAAATTTGA
TATTTCCAATTTATAATTTCAACAAGTCTATTTTTGCAAACTACATG back to top
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