EMLSAT00000005912, EMLSAT00000005912-701759 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005912
Unique NameEMLSAT00000005912-701759
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s31supercontigLSalAtl2s31:165920..167001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005912 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005912EMLSAG00000005912-688678Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025809EMLSAE00000025809-734737Lepeophtheirus salmonisexon
EMLSAE00000025810EMLSAE00000025810-734738Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773687auto773687Lepeophtheirus salmonispolypeptide
EMLSAP00000005912EMLSAP00000005912Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005912

>EMLSAP00000005912 ID=EMLSAP00000005912|Name=EMLSAP00000005912|organism=Lepeophtheirus salmonis|type=polypeptide|length=207bp
MSSVDHRNSSDLEIQIKYGLRAKSIQRRIEVESKVRAPKPEKRTPKPRSR
PPPLSKYRRKTANARERDRMREINDAFEALQKAIPGMEVKKEEKCTKLNT
LKLAMNYIKALSDLLVCTTPTSSSSNSPSPSSDSSRSSEEPSSPSNSVSS
LSSSPLRDVLFSGKTSDYLEDSFSLDDLPSLPDSFELLLTEEDFSLSTVM
DEPSLYR
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mRNA from alignment at LSalAtl2s31:165920..167001-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005912-701759 ID=EMLSAT00000005912-701759|Name=EMLSAT00000005912|organism=Lepeophtheirus salmonis|type=mRNA|length=1082bp|location=Sequence derived from alignment at LSalAtl2s31:165920..167001- (Lepeophtheirus salmonis)
ATGAGTAGTGTTGATCACAGAAATTCGTCGGATTTAGAGATTCAAATCAA
ATATGGTCTCCGTGCAAAGTCAATTCAACGTCGTATTGAAGTAGAGTCAA
AAGTTCGTGCACCAAAACCTGAAAAAAGGACTCCAAAACCTCGTTCACGK
CCCCCTCCCCTCTCWAAATATCGGAGAAAAACAGCCAATGCACGTGAAAG
GGATCGGATGCGAGAGATCAATGATGCATTTGAGGCTCTTCAAAAGGCCA
TACCCGGAATGGAGGTCAAAAAGGAGGAAAAGTGCACCAAGCTAAACACT
CTTAAATTAGCCATGAACTACATCAAGGTAAAAAATGCAAAAAAATGACT
TCAAACAACGACAATAATAATGTATTTTAGCAAGTTCTTTAACTCCATCA
CGAGTTTAGTTTTTCGGGGTTTTGAAGGTTTTTTTTTTTAAACTACAAAA
GGAAGTTTGTTTGTTTAATTGTATTCTTTTTTTTATATTTTCAAACACAA
GTTTAAGCTTTTGGGGTTTTTGGAGGGTTTTTGAGGGTTTGTTGTAAAAC
GATGTTTGTTTGTATAATTGTCTTCCGTCTTCAAAATTTTCAATTGTTGC
TATTGTTTTTGGAAATTTTGAGGATTTTTTATTGAAAAAGGAAGTTTGTT
CGTTTAATGGTCTTCCTTCTTCTAAATTATTAATCTCAAGTTTAGTTTTT
TTGGGTTTAAAATGATTTTTTTTTGTAAAAGGGATTTTGTTTGTTTGCTG
TTTGGCGTCATTGGCAATGATTTGATCCTTTGCAGGCTCTCAGCGACCTC
TTGGTTTGTACAACCCCAACATCCTCATCCTCTAACTCCCCCTCGCCGTC
CTCTGACTCATCACGGAGTAGTGAAGAGCCCAGCTCGCCCTCGAACAGTG
TTTCATCCTTATCTTCCTCACCCTTAAGAGACGTACTCTTTTCGGGCAAA
ACTTCAGACTATCTAGAGGACTCCTTCTCATTGGATGATCTCCCTTCCCT
TCCAGACTCTTTTGAGCTGCTCCTAACAGAGGAAGACTTTTCACTCTCCA
CAGTCATGGATGAACCTAGTCTCTATCGTTGA
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