EMLSAT00000005956, EMLSAT00000005956-701803 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005956
Unique NameEMLSAT00000005956-701803
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s321supercontigLSalAtl2s321:644148..645585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005956 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005956EMLSAG00000005956-688722Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025977EMLSAE00000025977-734905Lepeophtheirus salmonisexon
EMLSAE00000025978EMLSAE00000025978-734906Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779085auto779085Lepeophtheirus salmonispolypeptide
EMLSAP00000005956EMLSAP00000005956Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005956

>EMLSAP00000005956 ID=EMLSAP00000005956|Name=EMLSAP00000005956|organism=Lepeophtheirus salmonis|type=polypeptide|length=280bp
MRLLFLLGTVFYVLSLXXSKKPERCDPSYCKLPECYCGGQDIPGGLKKDE
IPQFVLLTFDDAVNNLNRKFFEKLFTDRTNPNGCPIKSTFYVSHEWTDYS
HVQDLYADGHEIASHTVTHSHGTQFSEEKWANEVVGEAEMLVRYAGVNPK
DIKGMRAPFLAIGGDTMFNTLNRYGFHYDSSMSVAIPSWPYTLEYKMPHS
CAVKPCPEKSHPGMWEVPMTTIKDIRGGTCSMADGCFYEEKSTSIQKIFT
QNFLEHYTKSKAPXXXKKHVYTKNLHTKLP
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mRNA from alignment at LSalAtl2s321:644148..645585+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005956-701803 ID=EMLSAT00000005956-701803|Name=EMLSAT00000005956|organism=Lepeophtheirus salmonis|type=mRNA|length=1438bp|location=Sequence derived from alignment at LSalAtl2s321:644148..645585+ (Lepeophtheirus salmonis)
ATGAGGTTACTCTTTCTTTTGGGCACTGTTTTTTATGTTTTGAGTCTTMC
GGYCTCAAAGAAACCAGAGAGATGCGACCCTTCCTATTGTAAACTTCCTG
AATGTTATTGCGGCGGMCAAGACATTCCTGGTGGACTCAAAAAGGATGAA
ATCCCACAATTTGTTCTCCTTACTTTTGATGATGCTGTAAATAATTTGAA
CAGAAAGTTCTTTGAGAAGTTATTCACTGATCGAACGAATCCCAACGGAT
GTCCAATCAAAGTATGCACATAATAATTTAATTAACTTATTGCAACAAAT
CTCAACACTTTATTTAACATTTTTATTTTTATTATAGTCTACTTTTTACG
TGTCTCACGAATGGACTGACTACTCTCACGTTCAAGACTTGTACGCTGAC
GGACACGAAATCGCCTCTCACACCGTCACACATAGTCACGGAACCCAATT
CAGTGAAGAAAAATGGGCCAATGAAGTTGTAGGTGAGGCTGAGATGTTGG
TGCGTTATGCTGGTGTAAACCCAAAGGATATTAAGGGCATGAGAGCTCCT
TTCTTAGCCATTGGAGGGGACACAATGTTCAATACCCTCAATCGCTATGG
ATTTCACTACGATTCATCCATGAGTGTTGCAATTCCCTCTTGGCCATATA
CCCTTGAGTACAAAATGCCTCACTCCTGTGCTGTGAAACCCTGTCCAGAG
AAAAGCCATCCTGGTATGTGGGAAGTTCCTATGACCACAATCAAGGACAT
TCGTGGTGGAACTTGTTCCATGGCTGATGGATGTTTCTATGAGGAAAAAA
GCACGTCTATACAAAAAATCTTCACACAAAACTTCCTTGAGCACTACACC
AAATCCAAGGCTCCCNNNNNNNGGAAAAAGCACGTCTATACAAAAAATCT
TCACACAAAACTTCCTTGAGCACTACACCAAATCCAAGGCTCCCTTCCCC
CTCTTTTTCCATGCAGCTTGGTTCTTTAACCGCCCACACCGTGTTGAAGG
TTTCTTGAAATTCATTGACTCCATTCTCGCACTTCCAGATGTTTACTTTA
TCACTAGTCAAGAATTAATTAACTGGGTCAGATATCCAGAAAGTTTGGAC
ACAATCATCAACTCTCCAGTTGTAGGATGTTCCTTTGATGACAGACCTGC
TCGATGTGGTAGAAAAAAATCCAAATGCCAATTAAAGCATAAGGGGGATG
TCAGACAATTTGCTTCGTGCCAAACTTCCTGTSCCAATAGATACCCATGG
GTGAATAATTTGAACGGAGACTAAGTAAAATAGCTTTTATGGGCTGGTCT
TAAATAGACAACTTGTATTTAAAGTACCATTTACTTTCAAATATGTTATG
TATTAAACATATGCAACTCCGTCCTTTCTATCTAATTTGTTTCTACTATT
TCGAACCCAAAAACATATATATATATATATATATAGGT
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