EMLSAT00000005962, EMLSAT00000005962-701809 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005962
Unique NameEMLSAT00000005962-701809
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s321supercontigLSalAtl2s321:781716..782741 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005962 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005962EMLSAG00000005962-688728Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025999EMLSAE00000025999-734927Lepeophtheirus salmonisexon
EMLSAE00000026000EMLSAE00000026000-734928Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779685auto779685Lepeophtheirus salmonispolypeptide
EMLSAP00000005962EMLSAP00000005962Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005962

>EMLSAP00000005962 ID=EMLSAP00000005962|Name=EMLSAP00000005962|organism=Lepeophtheirus salmonis|type=polypeptide|length=211bp
MGKGSNGFSEEQVEIYRECFRLMDMDKDGVISKTDLRAAFDNVGRLMMEP
ELDAMLAEMNGPCNFDNMLRCFETKMAGXVNDPDDLILNAFKVYDEEISE
TVKGVTTVKHIIDRENFRQILMCFGDKMTAEEIDDIFEEFDYDDDTGGIL
TKSAVDLFVAGGMDEKEENKKEEEKDGKKAEAAQTNDAAQSNTPSAGEGA
KKKKKKKKAAK
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mRNA from alignment at LSalAtl2s321:781716..782741+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005962-701809 ID=EMLSAT00000005962-701809|Name=EMLSAT00000005962|organism=Lepeophtheirus salmonis|type=mRNA|length=1026bp|location=Sequence derived from alignment at LSalAtl2s321:781716..782741+ (Lepeophtheirus salmonis)
CTTTCACTCCTCAGTGGATTCACTTTCATTGAAGATGGGTAAGGGTTCAA
ACGGATTTTCCGAGGAACAAGTAGAAATCTATCGAGAATGTTTCCGACTA
ATGGATATGGATAAGGACGGAGTTATCAGTAAAACAGATCTCCGCGCTGC
CTTTGATAATGTTGGACGACTCATGATGGAGCCAGAATTGGATGCTATGT
TGGCAGAAATGAATGGACCTTGTAACTTTGATAATATGCTCCGATGCTTT
GAAACAAAAATGGCTGGGGYCGTGAATGATCCAGATGATCTTATTCTCAA
TGCCTTCAAAGTCTACGATGAAGAAAGTAAGCTAGATCTATTCTTCAGAT
ACTTTGGTCCCTCTCATAACTTATATATTCCTTTTCTTTCATTTTATGTA
GTTTCTGAGACCGTCAAGGGAGTCACGACCGTCAAACACATAATTGACAG
GGAAAACTTCCGTCAAATTCTAATGTGCTTTGGAGACAAAATGACAGCCG
AGGAAATCGACGATATTTTCGAGGAGTTTGACTATGATGATGACACGGGT
GGAATCCTTACAAAGTCAGCTGTGGATTTGTTCGTTGCAGGTGGAATGGA
TGAAAAGGAAGAGAATAAAAAAGAGGAGGAAAAAGATGGAAAGAAGGCAG
AGGCTGCTCAGACCAATGATGCTGCCCAGTCCAACACTCCATCTGCAGGA
GAAGGCGCTAAGAAAAAGAAAAAGAAGAAGAAGGCCGCCAAATAAATTTT
GAAGGCCCAGGAGATGATGACAAATCAAAGAATTGGACTTGTACTGTATA
ATAATATGCAACAACCCACAGTCAAACTTGGTGAACACAGTCCATCCCTT
CCTGTGGTTTGTTGCTCTTCTTTATAATTAATTATGATTTTGTACGTTTA
AGTTGAACAATAAAGAGAGATTTCTTAATATACGAATGTTGTTATTAATT
GTTCAGCTATTTTAAATGATTGACAGTTCGGCGTTATCATCTTTTTCTCG
TAATCATTGAATAAACTTAACATGTG
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