EMLSAT00000005964, EMLSAT00000005964-701811 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005964
Unique NameEMLSAT00000005964-701811
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s321supercontigLSalAtl2s321:859804..863481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005964 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005964EMLSAG00000005964-688730Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026016EMLSAE00000026016-734944Lepeophtheirus salmonisexon
EMLSAE00000026017EMLSAE00000026017-734945Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779926auto779926Lepeophtheirus salmonispolypeptide
EMLSAP00000005964EMLSAP00000005964Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005964

>EMLSAP00000005964 ID=EMLSAP00000005964|Name=EMLSAP00000005964|organism=Lepeophtheirus salmonis|type=polypeptide|length=94bp
ENEVLKKEKCVLQRQVDRNIEAESKRKTEVSDLKLRLGESQRLYSNATRE
IEEKERQNKKHESTIKTLQLRLERQDESLDKSRNEXGELKALNK
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mRNA from alignment at LSalAtl2s321:859804..863481-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005964-701811 ID=EMLSAT00000005964-701811|Name=EMLSAT00000005964|organism=Lepeophtheirus salmonis|type=mRNA|length=3678bp|location=Sequence derived from alignment at LSalAtl2s321:859804..863481- (Lepeophtheirus salmonis)
GAAAATGAGGTGCTTAAAAAGGAGAAATGCGTCCTTCAAAGACAGGTTGA
TCGTAATATAGAAGCCGAGTCCAAACGGAAGACTGAAGTTTCCGATCTTA
AACTAAGGCTTGGAGAGAGCCAAAGGCTCTATAGCAATGCAACTCGTGAG
ATTGAGGAGAAAGAGAGGTAAGGATTAGGGGATGCCTACTTATCAACTGC
AATTCAGTCTAGAAAATATGGACTTGATATATCTAATTCGGCATTCAGAC
CAGTTCTACGAACTAATTCGGTCTGGATCAATTAAATCTAAAACTTTTTT
AATTAACAGACGTCAAGGTTATTGTAGAAAAACAAACATGACTAGAGTTG
TATATCCGAAGCATTTTCTGTATGTGAACCCCCTCCTCCCAAGGAACAAT
AGGAACTATGCTTGTGAGCAGAGAAATGTAAAGTTTTGAGTTGTGAAAAA
TATGACTTTAGACGAGTATGAGACTTATTGTATTTGCAACCTGGAGAGAG
TTTTTTATTTTACAAAACTGTCATCATTANTTCTTTAAGATAGAACATCT
AAGTATAAAGTAAGCACTCGAGCATTAAATACGAAGAGTAACACTGATGA
TTTGCTGGGGAGTTGTAAGCCTCTAATGGACTCAGATTAGAATTGAGGAT
CGACACTTGTCTAGTTCTTACCTATGTCATTGCTAAATTTCCTGTAGCTT
CTAGCTGCTCCAGGGTAATCTTGTCAAACTTCGTGATAGTTAAGCTACAA
AAAAAATCTTCAAATTGTCAGGATTACCATGTAGATTTTCAGTTCTTATA
ACAAATCGGCAGGMCATATTTTTRACAGCTCTAATGTGTCATTCGATCAG
GMATAAGCAGCTGGGTGGGATGGAGGAGAAAGGAAATAAACAAGGACGTA
TGCTGGAATGACTCTGATCTTCAATTCTACTCAGAGTCCAACAAGGACTT
ACTCTCCCCAACAAATCCTCAGTCTTACTCACCGTCCTTCATGAGCACGT
TCACACATAGTCCCTTTATACCCCCACGTCTATAATGAAATAAAAAAAAA
TACTGGTCATAAAGTCAACTACAAAAAACTCTCACACTAAAATTTCGTCA
AAGTTGCCAACATATATTTTTCTTTTTGATTGTAAATCAATCACGAAGAC
TTTGACAATTTTCACATCCCTAACAATGACTGTATGTCCTTCACTTCTAT
TACTTGAGTAAAAAATAATCAGCAGAGTACGAAGGTTTGTGCCCCTGTAG
TTCCTAGAGAAAGAAATATACTTTATGTACATGGACTTTAAAGAAGATTC
CCAATCCTATAATATTTACTTATACTTAACAGTGTAACTCTATCTGACTA
ATTAAAGGAACATAAAAAATATAGAACTGTATAAATTATGAAATACTGGC
ATTCTAAAAAAAGAAACCAAAGAGAGACAATGGTAGCAATTTATTTTCCA
AAGATATTTACTGTTTCAAACATTCGAACAGATTCACTGTTCTAAGAGTA
AATTCTACTAATATTTTCTCCTTAATTTTTTAAAAAAAATCACCATATAT
AGATTTGAGGGTGTATCTCCACCAATGGTCAATACCATGACTAAAATATC
AACAAAGTAGTTTAATATCTGTTATAGAGATGCAGATATTTGAATTTTGA
TAAATTCAACATTATGATATTCAAATAAGAGTCTCTTTTTACCTTATTAC
CCCCACTGTCAAAATTTTGAATATTGAATAACGGTCCATTGTTTAAGAAC
GATTTAATATCAGTTTAAGGTRTTTATTAAGATTKATAAGSGAGCCATAG
TTATAATTTAAACTAAATAATTATTATTTTATAAAAAAAAATAATGAGAA
AAGTGATTATATGTCTAAAATGCTTATAAAATGAAGATCAAGTAAATTTT
GCAATTTTATTAAAATTCTAGGGGATCTTTTAACNGAGGGTTCAAGTGAC
GTTTCTAATGACATAAAAAGACGATCACAAAGTTTGAACCATTTTTATGA
ATATTTAGAGCTAGCTCAATATCCCTAAAGTTTTAAATTTTACATATTTG
TGGAAAAAAAGTGATTTAAAAAAAATATAATTCGTATACTACACATTAAA
GCTTGTTAGTAAAATTAAAAAATTTAGTTAAGTTAAACTTCTATCAAAAT
TTTTGTGTAAATGTTATGTATATATAATATTTTACTACGTCTTAAATAAA
GGATAAAAATATTCAAATGGTATGTAACATTTTTGCCTATCTGTCAGTTC
ACCTGCGTATCACAGACAATTAGCATCTATTGATATCTTAAAAAAATTAC
AAATACGTTGCTTTTACTTAGATTAACAAAAAAAAGTGTCCATTTTGTGA
CCTTAACCCTGATGACCGGTTTTTAGGAAAAACATATATATAGCTAGGTT
TTTAAAATAAATCAAAAATTGTGTAAAATAAAAAAAATTATTTTAATTAA
TTAATACTTGATTATTTTATAAATGACATAATTAAATTAAGGTCGTTGTA
AGGAGCGTTCGAGGTTTATATGCATTGATACATATTCGTACTATAAAAAT
ACATAAATTTCGCAATCCTCATTCTTCTCTAGGAGTTAATTTAAATAGAT
GTTTTTCCTCAAAAAGGTCATAAAAAAGGTCATCAAGGTTAAGGCCATCA
AAATGACACTTTTTTTTTGTTGTTCATCTAAGTAAAAACGTATTTGCAAT
TTTTTTAAGATATCAGTAGCCGCTCATTTGCTGTGATACGCAGGTGAACT
AACACATAGGCAAAAGGCTACGTCTCATTACAATATTTTTATTGTTCTTT
AAGACACTTAAAAATTATTTATCATAAACATTTATGAAAAACTTTTGATA
AAAGTTTAACTTAACTAAAGTTGTTAATTTCATTAACAAGTTGTAATGTG
TAGTATACGGATAATACTAAAACAAAATCACGTTTTTTTCCAAAAATATG
TAAAATTTTAAAACTTTAGAGCCATTGAAATAACCTAAAAATTCATAAAA
ATTGTTCAAACTTTGTGAATCGTATTTTTTTATCAAAAGGAACACATTGG
AGCTCTCAATTTTTCCTAAATATGCATCAGAAAAATCCTTGAACGCAAAA
AAAGAAACAAAAAAGAGATCATTCCGAAAATGAGACATCCTGATGACACC
ACAGTTTTAAGTAGTTTGTCATTTTCTGTGAATTTATAATGCTTCCAATT
TAAAAAATTACCCTATATAGATTTGAGGGTGTATCTCCACCAATGGTCAA
TACTATGACCAAAATATCAACAAAGTAGTTTAATATCTGTTAAAGAGATG
GAAATATTGGAATTTTTGATAAATTCAACATTATAAAATTCAATTAAGTG
TCTCTTTTTATCTTATTACCCCTACTGTCAAAATTTTTGATATTGAATAA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAATTA
ATTATACTTTCAGACAAAATAAGAAACACGAATCTACGATCAAGACTCTA
CAACTACGTCTAGAACGACAGGATGAGTCCCTTGATAAGAGTCGCAATGA
GGKGGGAGAGCTCAAGGCTTTAAACAAA
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