EMLSAT00000005985, EMLSAT00000005985-701832 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005985
Unique NameEMLSAT00000005985-701832
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s322supercontigLSalAtl2s322:1028992..1029576 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005985 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005985EMLSAG00000005985-688751Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026116EMLSAE00000026116-735044Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780284auto780284Lepeophtheirus salmonispolypeptide
EMLSAP00000005985EMLSAP00000005985Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005985

>EMLSAP00000005985 ID=EMLSAP00000005985|Name=EMLSAP00000005985|organism=Lepeophtheirus salmonis|type=polypeptide|length=194bp
MYKYIVAFALLSSVYGSHHAPTPASYDAPKPATYDAPAPTPAPYHPPRPA
PYHAPAPSYKPTKYKEAPQPYAFQYGVADDYTGSNFSAEENADGKITSGS
YKVALPDGRIQTVTYTVDAYNGFVADVQYEGTPVYPKYEPKPSSYKAAPV
PAYKPTPXXPTSLLPPIRLKRIFTYLFIYYYFSPYKLCRKIKFI
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mRNA from alignment at LSalAtl2s322:1028992..1029576+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005985-701832 ID=EMLSAT00000005985-701832|Name=EMLSAT00000005985|organism=Lepeophtheirus salmonis|type=mRNA|length=585bp|location=Sequence derived from alignment at LSalAtl2s322:1028992..1029576+ (Lepeophtheirus salmonis)
ATGTACAAATATATCGTAGCTTTTGCTCTCCTTTCCTCTGTCTATGGCAG
TCATCACGCTCCAACTCCTGCTTCCTATGACGCACCAAAACCTGCTACCT
ATGATGCACCAGCACCAACCCCAGCTCCTTACCATCCTCCACGACCTGCT
CCATACCACGCCCCTGCTCCTTCCTACAAACCCACCAAATACAAAGAAGC
ACCACAACCCTATGCCTTCCAATATGGTGTAGCTGATGACTACACTGGCT
CCAACTTCTCAGCTGAAGAAAATGCTGATGGAAAGATCACCTCCGGATCC
TACAAAGTAGCTCTTCCCGATGGTCGTATTCAAACTGTTACTTATACAGT
TGATGCCTACAATGGATTCGTCGCTGATGTTCAATACGAAGGAACTCCTG
TCTACCCCAAGTACGAACCCAAACCATCTTCCTACAAGGCTGCTCCCGTC
CCAGCTTACAAGCCCACTCCNNNNNTTCCTACAAGCCTGCTCCCTCCTAT
AAGGCTTAAAAGAATATTTACATATTTATTTATTTATTATTATTTTTCAC
CTTACAAGTTATGTCGAAAAATAAAGTTTATTTGA
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