EMLSAT00000005987, EMLSAT00000005987-701834 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005987
Unique NameEMLSAT00000005987-701834
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3235supercontigLSalAtl2s3235:10703..11134 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005987 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005987EMLSAG00000005987-688753Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026118EMLSAE00000026118-735046Lepeophtheirus salmonisexon
EMLSAE00000026119EMLSAE00000026119-735047Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768941auto768941Lepeophtheirus salmonispolypeptide
EMLSAP00000005987EMLSAP00000005987Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005987

>EMLSAP00000005987 ID=EMLSAP00000005987|Name=EMLSAP00000005987|organism=Lepeophtheirus salmonis|type=polypeptide|length=121bp
MVSIWPGPVKTEEITNRVLENPEARNSAKRTFESGESTEFTGMAIVKLAS
DPNKIQCTGKILLTSFLARKYDIKDLNGTITGDMFSLKNILQVRGHNWIS
SLIPSFITIPTIFIHYLSNKF
back to top

mRNA from alignment at LSalAtl2s3235:10703..11134-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005987-701834 ID=EMLSAT00000005987-701834|Name=EMLSAT00000005987|organism=Lepeophtheirus salmonis|type=mRNA|length=432bp|location=Sequence derived from alignment at LSalAtl2s3235:10703..11134- (Lepeophtheirus salmonis)
ATGGTCTCTATTTGGCCAGGTCCGGTGAAAACTGAGGAAATAACAAATAG
GGTTTTGGGTTCGTATACACGCAAGTTACATCAAAGATGCATTTAGTTTA
CTAATGATATGTTCAACACTCTAGAAAATCCTGAGGCACGGAATAGTGCC
AAAAGAACGTTTGAATCAGGAGAATCAACAGAGTTCACGGGGATGGCGAT
CGTCAAATTAGCATCAGATCCTAATAAAATTCAATGTACAGGGAAAATTC
TATTAACAAGTTTTTTGGCAAGGAAATATGATATAAAGGACTTGAACGGT
ACAATAACAGGAGATATGTTTTCACTTAAAAATATTTTACAAGTACGTGG
ACATAATTGGATTTCATCCCTGATACCATCCTTCATAACCATTCCTACGA
TTTTCATTCATTATCTATCCAATAAATTTTGA
back to top
Add to Basket