EMLSAT00000006022, EMLSAT00000006022-701869 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006022
Unique NameEMLSAT00000006022-701869
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s327supercontigLSalAtl2s327:123273..124660 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006022 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006022EMLSAG00000006022-688788Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026262EMLSAE00000026262-735190Lepeophtheirus salmonisexon
EMLSAE00000026263EMLSAE00000026263-735191Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772715auto772715Lepeophtheirus salmonispolypeptide
EMLSAP00000006022EMLSAP00000006022Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006022

>EMLSAP00000006022 ID=EMLSAP00000006022|Name=EMLSAP00000006022|organism=Lepeophtheirus salmonis|type=polypeptide|length=444bp
MQNYITVEPVQLFYGIMAMVSSVVRDHLFIEKVCQVHLNYSSNICSNLSQ
NKEIKDEVQEIVTELEIIDGTLVAIPAVVFSLFMGSWSDRNGRKFLLILP
FIGNIIAFLVYILNYYFFFELGIYNLLWGSSVGMFGGYVCLNIGXXGXIA
DXSTITSRTTRLSYLNGITSLSFVIGSAIGGQLFNAMHNYYIIFGISIGF
GILGIIYSIFFVKESIIPKEESEETNRGLFDLYHVKECFKTATKDRSTFY
PRFGVIILVLHFASMMFCLNTSHYDYLLMVNKFDWGVHDFSNFLIVTRIV
RFVGLLLLLPLLSSVFHIRDEAITLFGTILTCLSYLIIALGQSSILMFVA
VVFQFNSIVTVSIRSQCTKATSPEEVGKVFAVIALGQSLVPLVSNPLFGL
VYRETLTTFPGAYLIIVCAFLLVACVGAAYLYNFKRRNSHVNMS
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mRNA from alignment at LSalAtl2s327:123273..124660+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006022-701869 ID=EMLSAT00000006022-701869|Name=EMLSAT00000006022|organism=Lepeophtheirus salmonis|type=mRNA|length=1388bp|location=Sequence derived from alignment at LSalAtl2s327:123273..124660+ (Lepeophtheirus salmonis)
ATGCAGAATTATATAACTGTGGAACCTGTCCAGCTTTTCTACGGTATCAT
GGCTATGGTATCCAGCGTTGTAAGAGACCATTTATTCATTGAGAAAGTTT
GTCAAGTTCATTTAAATTATTCATCTAATATCTGCTCGAACTTAAGTCAG
AATAAGGAAATTAAGGATGAGGTTCAAGAAATAGTAACTGAGCTGGAAAT
CATTGATGGTACGCTTGTTGCAATCCCAGCTGTTGTTTTTTCTCTGTTTA
TGGGCTCATGGTCCGATCGAAATGGACGGAAGTTCCTTTTAATCCTGCCT
TTCATTGGAAACATAATAGCGTTCCTTGTGTACATCCTCAATTATTATTT
CTTTTTTGAGCTTGGAATATACAATTTGTTGTGGGGATCCAGTGTTGGAA
TGTTTGGAGGCTACGTGTGTTTAAATATTGGCTTKTWTGGATAMATAGCA
GACGKCAGTACAATTACCTCAAGGTATAACTTGATTAGACTTATTACAAA
TCACAGAATTTTTATTTTATTTTTAGAACCACGAGACTGAGCTACCTCAA
TGGAATAACAAGTCTTAGCTTCGTTATTGGAAGTGCAATTGGCGGGCAAC
TTTTCAATGCAATGCACAACTATTACATCATATTTGGAATAAGTATTGGT
TTTGGAATCTTGGGGATTATATATTCGATATTTTTCGTCAAAGAGAGCAT
CATTCCCAAAGAAGAGTCTGAGGAAACAAATAGGGGGTTATTTGATCTGT
ATCATGTGAAAGAGTGCTTTAAGACGGCAACTAAAGATCGTTCAACATTT
TATCCGCGATTCGGAGTGATAATACTCGTCCTTCACTTTGCGTCTATGAT
GTTTTGTCTTAATACAAGTCACTATGATTACCTCCTAATGGTCAATAAGT
TTGATTGGGGCGTGCACGACTTTTCAAACTTTCTAATTGTGACGAGGATT
GTTCGATTTGTAGGACTGCTCCTACTCCTCCCACTTTTAAGTTCCGTATT
CCACATAAGAGACGAGGCCATTACACTTTTTGGAACTATTTTAACGTGCC
TCTCGTACTTAATCATAGCACTGGGACAATCCTCGATCCTCATGTTTGTT
GCAGTGGTATTTCAGTTCAATTCAATTGTGACAGTGAGTATTCGATCCCA
GTGCACCAAGGCTACCAGTCCAGAAGAGGTAGGAAAAGTTTTTGCAGTCA
TTGCTTTAGGACAATCTCTCGTTCCCTTAGTATCCAATCCCCTATTTGGA
CTCGTATACAGAGAGACTCTAACGACTTTTCCAGGTGCCTATCTCATCAT
TGTTTGTGCATTCCTCTTGGTAGCTTGTGTGGGGGCTGCATATTTATACA
ACTTTAAAAGAAGAAACTCGCATGTAAATATGAGTTAA
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