EMLSAT00000006033, EMLSAT00000006033-701880 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006033
Unique NameEMLSAT00000006033-701880
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s327supercontigLSalAtl2s327:348773..350410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006033 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006033EMLSAG00000006033-688799Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026316EMLSAE00000026316-735244Lepeophtheirus salmonisexon
EMLSAE00000026317EMLSAE00000026317-735245Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776683auto776683Lepeophtheirus salmonispolypeptide
EMLSAP00000006033EMLSAP00000006033Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006033

>EMLSAP00000006033 ID=EMLSAP00000006033|Name=EMLSAP00000006033|organism=Lepeophtheirus salmonis|type=polypeptide|length=507bp
MATPDRKLNLEVLLRDVGEFGNCDSQNPTFHDASVEGFDQFAYPKDDHAC
HVYKNNSNTCDAHAFHSKEILNCTRWIYDYSTYGNNFISEFNLVCSQETR
GPLLFSSFFAGQMLGVLPIGAFADLFGRKIVFLVSSLSLAMIGSAQALFT
YDYRSLLIFSFLSGIFQSGFFQLGYILSIEIVGKSKRLFCGSAIQICFVI
GELYLSLAAWYFRDWRKVLLSYSIPCFFSIFYIKLIPESPRWLLTKGKTV
ELEELALKIAMSNQSPTPNMENYYYEQVLSSTDPPEGLLQFLGSKKLLLR
MTILSLGWFIVGMGYYGISLHASSLAGSIYLNFFLLSLVEFPGYGLSFLS
MKLNGRRNTMVGSLIIAGLSIIISNLQNIPWITTLLYLLAKMSITCAFAT
IYLYTSELLPTALRTGGVSTTSFIGKIGALISPYISLLSFILGSKTIMIV
FGISPLLCGLLFLCLPETLGKGLPNNIQEAERIGSLEYIDNSISNLSEAE
PLIQESS
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mRNA from alignment at LSalAtl2s327:348773..350410+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006033-701880 ID=EMLSAT00000006033-701880|Name=EMLSAT00000006033|organism=Lepeophtheirus salmonis|type=mRNA|length=1638bp|location=Sequence derived from alignment at LSalAtl2s327:348773..350410+ (Lepeophtheirus salmonis)
ATGGCCACACCAGATAGAAAATTAAATTTGGAAGTTCTTCTTCGAGATGT GGGAGAGTTTGGAAGTTTTCAGAAGCGAGTATGTTACATGCTCTGTGCAC TTATTTCCCTATCGGGTGCTATGAACTTTTCTTTTACATTTACGAGTGCA ATTCCACCATTCAGATGTCTTGTTCCAGATTGTGACTCTCAAAATCCTAC ATTCCATGATGCGTCTGTCGAAGGTTTTGATCAATTCGCTTATCCAAAGG ATGATCATGCTTGTCATGTCTACAAAAATAACTCCAACACCTGTGATGCA CATGCCTTTCATTCAAAAGAGATACTCAATTGCACGCGATGGATCTATGA TTATTCAACTTATGGAAATAATTTCATATCCGAGTTTAACCTTGTTTGTT CTCAAGAGACAAGGGGGCCTCTATTATTTAGTTCATTTTTTGCTGGTCAA ATGTTGGGTGTTTTACCCATTGGTGCTTTTGCAGATCTTTTTGGACGTAA AATTGTTTTTCTCGTCAGTTCATTAAGCTTAGCAATGATTGGATCTGCTC AAGCTCTATTTACATATGACTATCGATCTCTGCTGATATTTTCATTTCTT AGTGGGATTTTTCAAAGTGGATTTTTCCAATTAGGATACATTCTGTCCAT TGAAATTGTTGGAAAGTCAAAGAGACTCTTCTGTGGCTCAGCTATTCAAA TATGTTTTGTCATCGGTGAATTGTATCTATCTCTGGCTGCTTGGTATTTT AGAGACTGGAGAAAAGTTTTATTGAGTTACTCAATACCGTGCTTCTTCTC AATATTCTATATCAAACTTATTCCAGAGTCCCCAAGATGGTTACTCACAA AGGGAAAAACAGTAGAACTCGAAGAGCTTGCTCTTAAAATAGCAATGTCA AATCAATCCCCAACGCCAAATATGGAGAATTATTATTATGAACAGGTTTT ATCCTCTACCGATCCTCCAGAAGGTCTTCTTCAATTCTTAGGATCAAAAA AACTTTTACTTCGTATGACTATACTCTCTTTGGGGTGGTTCATTGTTGGG ATGGGGTACTATGGTATCTCCCTTCATGCCTCCTCCCTTGCTGGATCCAT CTATTTGAATTTCTTCTTACTTTCACTAGTTGAATTTCCAGGCTATGGAC TAAGCTTTTTATCAATGAAATTAAATGGACGAAGAAATACAATGGTAGGC TCTCTCATCATAGCAGGCCTCTCTATTATAATTTCCAATCTACAAAATAT TCCTTGGATCACTACTCTCTTATACTTGTTGGCGAAAATGAGTATCACAT GTGCATTTGCAACAATTTATCTGTATACGTCCGAATTACTCCCAACAGCC TTAAGAACTGGAGGTGTTAGTACAACCTCCTTCATTGGAAAAATAGGTGC ACTCATCTCACCCTACATTTCACTACTCTCCTTCATTTTAGGATCAAAGA CCATCATGATTGTTTTCGGCATATCACCCCTCCTCTGTGGATTACTATTT TTATGCCTCCCTGAAACATTGGGAAAGGGGCTTCCCAACAATATTCAAGA AGCGGAGCGGATAGGAAGTTTGGAGTATATAGATAATAGTATATCGAATC TCTCCGAAGCTGAGCCTCTTATTCAAGAAAGCTCCTAG
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