EMLSAT00000006138, EMLSAT00000006138-701985 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006138
Unique NameEMLSAT00000006138-701985
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s335supercontigLSalAtl2s335:340556..341608 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006138 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006138EMLSAG00000006138-688904Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026810EMLSAE00000026810-735738Lepeophtheirus salmonisexon
EMLSAE00000026811EMLSAE00000026811-735739Lepeophtheirus salmonisexon
EMLSAE00000026812EMLSAE00000026812-735740Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776574auto776574Lepeophtheirus salmonispolypeptide
EMLSAP00000006138EMLSAP00000006138Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006138

>EMLSAP00000006138 ID=EMLSAP00000006138|Name=EMLSAP00000006138|organism=Lepeophtheirus salmonis|type=polypeptide|length=168bp
MYFKLAILLFCFLFCAIAQNKDITLKAASLKSNCGCQCNXLWEDTRKLVD
KTGAKWCYVSRGNTCNDVTYSKRRDERGQPRQISNEACATPTCNGRFTGR
GQGGSFGGGNGGSGGGSFGGLFGASNGGGGYGENLITINEAKHSIFLEYT
IDLFEALEQQFFILYGIK
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mRNA from alignment at LSalAtl2s335:340556..341608-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006138-701985 ID=EMLSAT00000006138-701985|Name=EMLSAT00000006138|organism=Lepeophtheirus salmonis|type=mRNA|length=1053bp|location=Sequence derived from alignment at LSalAtl2s335:340556..341608- (Lepeophtheirus salmonis)
ATGTATTTCAAATTAGCAATCCTCCTTTTCTGTTTTTTGTTTTGTGCAAT
TGCACAAAATAAAGACATTACACTCAAGGCAGCTTCATTAAAATCCAATT
GTGGATGTCAATGTAATAANTTATGGGAAGACACAAGGAAATTGTAACAC
GTAAGATGTTTTCTAATTATTTACAAAAGAGTTGTGCTAAAATTGATATA
TATTTTTTAATATAGAGTCGACAAAACTGGAGCCAAATGGTGTTACGTCT
CTCGAGGAAATACTTGCAATGATGTGACATATTCGAAAAGAAGGGACGAG
AGAGGACAACCTAGACAGATATCGAATGAAGCTTGTGCCACTCCTACATG
TAATGGACGTTTTACCGGTAGAGGTCAAGGGGGATCCTTTGGAGGAGGCA
ACGGTGGAAGTGGTGGTGGATCATTCGGAGGACTTTTTGGGGCAAGTAAT
GGTGGAGGTGGATATGGCGAAAGTGGTTCTTTTGGAGGTGGCCAAGGAGG
CACTGGCTCSCTTGGAGGMGGYTCTTTTGGAGGAAGTGGTTCCTCTGGTG
GTGGATCTTTTGGAGGAAGTGGTTCCTCTGGAGGMGGATCTTTTGGAGGA
AGTCATGGGGGAAGTGGMTCTTTTGGAGGAAGTGGTTCCTCTGGAGGTGG
ATCTTTTGGAGAAAGTGGTTCATCTGGAGGAGGCTATGGTGGMAGTGGTT
CTCCACATGGCGGCTCTGGAAGTGGTGGCTCTATTGCTATAATCATTAAA
CCAAGAAAAGCTGACGCCATTACATTTTAGAAGCAATTCATAAATATGCC
AAATTTATAAAATCATTTCGTGAAATCGTCATTAAATTACATAAATTTGT
ACCTTAGTTTCATAAAATATGTTTCAMATTTAACACAGATGCACTTAGAT
ATTTTAATTAAAAAGTAATACAAATTTACAATGTTAACTTTATTAGATTT
AATTACAATTAATGAGGCCAAACACTCTATTTTCCTGGAGTATACTATAG
ATTTATTCGAGGCATTAGAACAGCAATTTTTCATATTGTATGGTATTAAA
TAA
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