EMLSAT00000006169, EMLSAT00000006169-702016 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006169
Unique NameEMLSAT00000006169-702016
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s336supercontigLSalAtl2s336:642811..644202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006169 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006169EMLSAG00000006169-688935Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026942EMLSAE00000026942-735870Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779080auto779080Lepeophtheirus salmonispolypeptide
EMLSAP00000006169EMLSAP00000006169Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006169

>EMLSAP00000006169 ID=EMLSAP00000006169|Name=EMLSAP00000006169|organism=Lepeophtheirus salmonis|type=polypeptide|length=463bp
MRIINXPXAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVV
STNGDTHLGGEDFDQRVMEYFIKLYKKKKGKDLRKDNRAVQKLRREVEKA
KRALSSAHQVKIEVESIFEGDDFSETLTRAKFEELNMDLFRSTLKPVQKV
LDDADMQKKDIDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEAVA
YGAAVQAGVLSGEQDTGDIVLLDVNPLTMGIETVGGVMTKLIGRNTVVPT
KKSQIFSTAADNQNTVTIQVFEGERPMTKDNHLLGKFDLNGIPPAPRGTP
QIEVTFEIDANGILQVSAEDKGTGNKEKITITNDQNRLTPEDIEQMIHDA
EKFADEDKKLKERVESRNELESYAYSLKNQLNDKEKLGAKITDEEKEKME
EAVNEKISWLEEHQDADSEDFKAQKKELEDTVQPIIAKLYQGGAPPPGGE
APGGEDDMDKDEL
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mRNA from alignment at LSalAtl2s336:642811..644202-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006169-702016 ID=EMLSAT00000006169-702016|Name=EMLSAT00000006169|organism=Lepeophtheirus salmonis|type=mRNA|length=1392bp|location=Sequence derived from alignment at LSalAtl2s336:642811..644202- (Lepeophtheirus salmonis)
ATGCGCATTATCAACGAMCCCMCCGCAGCAGCCATTGCTTACGGTCTTGA CAAGAAGGAGGGCGAAAAGAATGTCCTGGTTTTCGATCTGGGAGGCGGTA CCTTTGACGTCTCTCTTCTTACTATTGATAATGGTGTATTTGAAGTCGTT TCTACCAATGGAGACACTCACTTGGGTGGAGAAGATTTCGATCAAAGAGT AATGGAGTACTTTATCAAGCTCTACAAAAAGAAGAAAGGAAAGGATCTCA GAAAAGATAACCGTGCCGTTCAAAAGTTGAGACGTGAAGTTGAGAAGGCT AAGCGAGCACTTTCCTCTGCTCATCAAGTTAAGATTGAAGTTGAGTCCAT CTTTGAAGGTGATGACTTTTCTGAAACATTGACTCGTGCCAAATTTGAAG AACTTAACATGGATCTCTTCCGTTCTACACTCAAACCCGTACAAAAAGTT TTGGATGATGCTGATATGCAAAAGAAGGATATTGATGAGATCGTACTTGT GGGGGGGTCCACTCGTATTCCTAAGGTTCAACAATTGGTCAAAGAATTCT TTAACGGAAAGGAACCCTCAAGAGGAATCAATCCTGATGAGGCTGTTGCC TATGGTGCTGCTGTTCAGGCTGGKGTCCTTTCTGGGGAACAAGATACCGG AGACATTGTATTGCTTGATGTTAATCCTTTGACAATGGGTATTGAAACTG TGGGAGGAGTCATGACTAAGCTCATTGGCCGTAACACTGTTGTTCCTACC AAAAAATCGCAAATTTTCTCAACTGCCGCTGATAACCAAAATACAGTAAC CATCCAAGTTTTCGAGGGTGAGCGTCCTATGACTAAAGATAACCATCTCT TGGGAAAATTCGATTTGAATGGCATTCCACCAGCCCCTAGAGGAACACCT CAGATTGAGGTTACCTTTGAAATTGATGCAAATGGTATTTTGCAAGTATC TGCTGAAGATAAGGGAACTGGAAACAAGGAAAAGATAACAATCACTAATG ACCAAAACAGGCTTACACCAGAAGATATTGAGCAAATGATCCATGACGCT GAAAAGTTTGCAGATGAGGATAAGAAACTTAAAGAACGTGTTGAATCTCG TAACGAATTGGAATCGTACGCTTACTCTCTGAAGAACCAACTCAATGATA AAGAAAAGTTGGGGGCTAAGATTACCGATGAAGAGAAAGAAAAGATGGAA GAAGCAGTTAACGAAAAGATCTCTTGGCTTGAAGAACACCAAGATGCTGA TTCAGAGGACTTCAAAGCTCAAAAGAAAGAATTGGAAGATACCGTTCAAC CCATCATTGCTAAACTTTACCAAGGAGGAGCTCCCCCACCAGGTGGCGAG GCTCCTGGAGGCGAGGATGATATGGATAAGGACGAACTATAG
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