EMLSAT00000006194, EMLSAT00000006194-702041 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006194
Unique NameEMLSAT00000006194-702041
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s339supercontigLSalAtl2s339:12513..13893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006194 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006194EMLSAG00000006194-688960Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027021EMLSAE00000027021-735949Lepeophtheirus salmonisexon
EMLSAE00000027022EMLSAE00000027022-735950Lepeophtheirus salmonisexon
EMLSAE00000027023EMLSAE00000027023-735951Lepeophtheirus salmonisexon
EMLSAE00000027024EMLSAE00000027024-735952Lepeophtheirus salmonisexon
EMLSAE00000027025EMLSAE00000027025-735953Lepeophtheirus salmonisexon
EMLSAE00000027026EMLSAE00000027026-735954Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769012auto769012Lepeophtheirus salmonispolypeptide
EMLSAP00000006194EMLSAP00000006194Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006194

>EMLSAP00000006194 ID=EMLSAP00000006194|Name=EMLSAP00000006194|organism=Lepeophtheirus salmonis|type=polypeptide|length=332bp
MALIVERVDLLVNEVFKGIRNSSLMQYSALLGGSVVAYTVGKFLYQLADG
IRIHFWSRVCRINLKEKYGDWAIVTGCTSGIGRAITIELASRGINLALIA
RNPTFLKDLSEYIENEFKVKTLVIKADFKDTGIYEDIRDQLKPIENELGM
LFNNVGMSLDQVEDYTIAQNPSILDVINTNISSVALMSKIGIKMMETRRR
GIIVNVSSIAGIYVLPLASLYSSTKGFVNHFSRNMYYECRQKGISVQNLV
PMGVRTNMLRSLMSNDDIGNTWTTPTSEVYAYNAINTVGRTYQTSGYWCH
SVVQWFFGICPLSILESSIHAHLRNSYAKKNK
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mRNA from alignment at LSalAtl2s339:12513..13893-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006194-702041 ID=EMLSAT00000006194-702041|Name=EMLSAT00000006194|organism=Lepeophtheirus salmonis|type=mRNA|length=1381bp|location=Sequence derived from alignment at LSalAtl2s339:12513..13893- (Lepeophtheirus salmonis)
TTAAACTATAAGTATTATCGTATTATGTAAGAAAATCTTATCTATTTACT
CACAAATATACTCTAACAAATTAAATCCACAGTTTAATAATGGCTCTCAT
TGTTGAAAGAGTAGATTTATTGGTAAACGAAGTCTTTAAGGGAATTCGTA
ACTCATCTTTAATGCAATACTCTGCTCTTCTGGGTGGTTCGGTAGTAGCT
TACACGGTAGGAAAATTCCTTTACCAACTTGCAGATGGAATTCGTATTCA
CTTTTGGTCAAGAGTTTGTCGTATCAACTTGAAAGAAAAATATGGAGATT
GGGCAATTGTCACTGGATGTACGAGTGGTATAGGTAGAGCCATCACAATA
GAGCTAGCCTCAAGAGGGATAAATCTTGCATTAATTGCTCGAAATCCGAC
TTTTTTAAAGGACTTATCAGAATATATCGGTACAGTTTACAACGTCAGAA
ATATAATTTATTATCATATTTTTCCAATACTGAGTTATTTATCAATAATA
TTAACAGCGTTGAATAATTAATAAATTTCATTTTATAAAAAGAGAATGAA
TTCAAGGTTAAAACTCTCGTCATTAAGGCGGATTTTAAGGACACGGGGAT
CTATGAGGACATAAGAGATCAATTGAAACCAATTGAAAACGAATTAGGAA
TGTTGTTTAATAATGTTGGAATGTCATTAGATCAAGTGGAAGATTATACA
ATAGTATTCATGTTCCTACTTATCGTAAATTATTTTTTAACCCTGTTTAT
CTAATTACAGGCCCAAAACCCTTCTATCTTGGACGTAATCAATACTAACA
TTTCTTCTGTGGCACTTATGTCTAAAATCGGAATTAAAATGATGGAAACA
CGGCGTCGTGGAATAATTGTGAATGTTTCTTCCATAGCAGGGATTTATGT
ACTGCCTTTAGCTTCTCTTTACTCATCCACTAAAGGATTTGTCAATCACT
TTTCACGAAATATGTATTATGAATGTAGACAAAAGGGAATATCCGTTCAA
AATCTTGTTCCTATGGGCGTTAGAACGAACATGTTAAGAAGTCTTATGTA
CGTTAGACGAATTAGTGTTTACTGAATGAATCACTCATTGTTTTTACCAC
ACAGGTCAAATGATGATATAGGAAACACATGGACAACTCCTACTTCGGAA
GTATATGCATATAATGCCATTAACACTGTGGGTAGAACTTATCAGACGTC
AGGTTATTGGTGTCATTCAGTGGTTCAGTGGTTTTTTGGTAAGTGAAGTG
GTAACTTTCATTTATATTATTCCTGCAGTCAAACNNNNNNTCCTAATACC
ATAGGTATATGTCCATTGTCGATATTGGAGTCTTCTATTCATGCCCACTT
AAGAAACTCATATGCCAAGAAAAATAAGTAA
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