EMLSAT00000006211, EMLSAT00000006211-702058 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006211
Unique NameEMLSAT00000006211-702058
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s33supercontigLSalAtl2s33:1205987..1207368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006211 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006211EMLSAG00000006211-688977Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027108EMLSAE00000027108-736036Lepeophtheirus salmonisexon
EMLSAE00000027109EMLSAE00000027109-736037Lepeophtheirus salmonisexon
EMLSAE00000027110EMLSAE00000027110-736038Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780529auto780529Lepeophtheirus salmonispolypeptide
EMLSAP00000006211EMLSAP00000006211Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006211

>EMLSAP00000006211 ID=EMLSAP00000006211|Name=EMLSAP00000006211|organism=Lepeophtheirus salmonis|type=polypeptide|length=400bp
MSSSLGLRLPSWAMFKKKRSADISALDSSYDVTYLGNVLTGWAKGEGCAK
KPLGTLWKNYANSEKPHIYMKVTICSSGLCATTREHGLTEYLPNRITYCQ
ADPTYPKVFCWIYRHDGRKMKQELRCHAILCRSERKAQDMAXKLKDRIRQ
AFIDFKKERISRQNARLSLANSGDTGTTVPLRKILLQNGSENYRAPIEKS
KTAPKXHAIEEVSPDIEEAEEKFYDSSFEDDDEILQKVEMGIDSVFDVGQ
RNYHHNHFMDHDSNGAEDPTSSPLYQKLRAEMNSSPSDDEDEVTDHLVNG
NVEETSRDIKKITADDQDAISDESGYAEDPVRYICNMGPSSSEEDEEDEE
DDSSASSTTSSVPSSLLDDKKPRTSFVLSLGDRKPYQRNSTLVPEFCINI
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mRNA from alignment at LSalAtl2s33:1205987..1207368-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006211-702058 ID=EMLSAT00000006211-702058|Name=EMLSAT00000006211|organism=Lepeophtheirus salmonis|type=mRNA|length=1382bp|location=Sequence derived from alignment at LSalAtl2s33:1205987..1207368- (Lepeophtheirus salmonis)
ATACTTTTTTTGAGAGATCAAAAAATAAACTCTACGATGTCTTCATCCTT
GGGTCTAAGACTCCCATCTTGGGCTATGTTTAAAAAGAAAAGATCGGCTG
ATATATCAGCTCTTGATTCATCGTACGACGTCACTTACCTTGGAAATGTC
CTTACGGGTTGGGCTAAAGGTAATGGATTAAACACAATTTTTTCCCTCCT
TGGATTTCGTTAATATTTGAGTAATCGTTTTTTTAGGGGAAGGCTGTGCT
AAAAAGCCTCTTGGAACTCTTTGGAAAAATTATGCAAACTCAGAAAAACC
TCATATTTACATGAAAGTCACCATTTGTAGCTCTGGTCTCTGTGCAACGA
CTAGAGAACATGGTTTGACAGAATATCTTCCCAATCGCATCACATATTGT
CAGGCAGATCCTACATATCCCAAAGTATTTTGTTGGATATATAGGTAAGT
TAACATGAGTCGAGGATTTAAAAAAAAACCAAACCGTATTTCATGTTTTT
TTTTTTCTTCATACTTGCAGACACGATGGTCGGAAAATGAAGCAAGAGCT
TCGATGTCATGCGATATTATGTCGTTCAGAGCGAAAGGCTCAGGATATGG
CTGKCAAATTAAAGGATCGTATTCGTCAAGCCTTCATTGACTTTAAAAAA
GAAAGAATCTCACGTCAAAATGCTCGTTTAAGTCTGGCCAATTCCGGAGA
CACTGGTACAACTGTTCCTCTTCGAAAAATCCTTCTTCAGAACGGTTCAG
AGAACTATCGCGCCCCAATCGAAAAGTCCAAAACTGCTCCCAAACKCCAT
GCCATCGAAGAAGTCTCTCCGGACATTGAAGAGGCAGAGGAAAAGTTTTA
CGACTCTTCCTTTGAAGATGATGACGAGATTCTTCAAAAAGTTGAAATGG
GAATCGATAGTGTCTTCGATGTAGGCCAGAGAAACTATCATCATAACCAT
TTCATGGACCACGACTCTAATGGTGCCGAAGACCCTACTTCTTCTCCACT
GTATCAAAAGCTACGAGCAGAAATGAACTCATCGCCGTCAGATGATGAAG
ACGAAGTCACGGATCATCTAGTGAATGGCAATGTAGAAGAAACGAGTAGA
GATATCAAGAAGATAACTGCTGATGATCAAGACGCAATTTCTGACGAGAG
TGGTTATGCGGAAGATCCAGTCAGATATATCTGTAATATGGGGCCCTCTT
CATCGGAAGAAGACGAGGAGGATGAAGAAGATGATTCCTCTGCATCTTCG
ACAACCTCTTCCGTCCCTTCTTCATTACTTGATGATAAGAAACCTCGTAC
TTCCTTCGTCTTATCTTTGGGAGATCGCAAACCATATCAAAGGAATAGCA
CGCTAGTACCAGAGTTCTGCATCAATATATGA
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