EMLSAT00000006238, EMLSAT00000006238-702085 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006238
Unique NameEMLSAT00000006238-702085
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3406supercontigLSalAtl2s3406:1370..2573 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006238 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006238EMLSAG00000006238-689004Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027221EMLSAE00000027221-736149Lepeophtheirus salmonisexon
EMLSAE00000027222EMLSAE00000027222-736150Lepeophtheirus salmonisexon
EMLSAE00000027223EMLSAE00000027223-736151Lepeophtheirus salmonisexon
EMLSAE00000027224EMLSAE00000027224-736152Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768125auto768125Lepeophtheirus salmonispolypeptide
EMLSAP00000006238EMLSAP00000006238Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006238

>EMLSAP00000006238 ID=EMLSAP00000006238|Name=EMLSAP00000006238|organism=Lepeophtheirus salmonis|type=polypeptide|length=276bp
MTLSHLFLFXLTVIIVTKASPNTKYWEAFDVLKICKSGIKQSPINLVERS
TIAKSGSPITFMNYDVAHNFSMKNTGKTAKLSLKEGVTNVPTITSSHLSN
DTYKFAQLHFHWGDMDKYGSEHVMDGFQYPIEVHLVHFNTKYGATIEEAL
SVANKSDNLAVLGVFFDIIPCTITDLDPLISKLTDIQSEGSKVDVKSFAL
EKLLPTDLNTFFSYEGSLTTPRCNEVVAWTVFKKKHMMSSEQLGEFRKLI
GGGEPLVNNYRDVQDLNGRQVDFYSA
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mRNA from alignment at LSalAtl2s3406:1370..2573+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006238-702085 ID=EMLSAT00000006238-702085|Name=EMLSAT00000006238|organism=Lepeophtheirus salmonis|type=mRNA|length=1204bp|location=Sequence derived from alignment at LSalAtl2s3406:1370..2573+ (Lepeophtheirus salmonis)
ATGACACTCTCACACCTTTTTTTGTTCTSTTTGACCGTCATAATTGTTAC
GAAGGCTTCTCCGAATACAAAATACTGGGAGGCTTTTGGTAAATAAATAA
ATACAAAAACAAAAAAAACAAAAACTCGATTATTTCAATGCAAATTATAT
TTATTTTTATTTATTGAAAATACATTAAATACTAAATATTAGTTTAGTAA
TAAAAAATTTCATTTAAAATTAGATGTATTAAAAATATGCAAATCTGGAA
TAAAACAATCACCAATTAATCTAGTGGAGAGATCAACCATTGCAGTGAGT
TCCTTGACATTCATATTATTTTTTATTTTTTTTCAACACATACATATTTT
ATAAATCAGAAAAGTGGAAGTCCTATTACGTTTATGAACTATGATGTTGC
ACATAATTTCTCTATGAAAAACACTGGAAAAACAGCAAAACTTTCTCTCA
AAGAGGGTGTGACAAATGTACCGACAATAACAAGTTCTCATCTCTCAAAC
GATACTTATAAATTTGCACAGCTTCATTTCCATTGGGGTGATATGGACAA
ATATGGTTCCGAGCACGTAATGGACGGATTCCAATATCCTATTGAAGTAC
ATTTGGTTCACTTTAACACAAAATATGGGGCTACAATTGAAGAAGCTTTG
AGCGTAGCAAACAAATCGGATAATTTAGCAGTTCTAGGAGTCTTTTTTGA
TATTATTCCCTGTACTATAACTGATTTAGATCCATTAATCTCTAAGCTTA
CAGATATCCAATCWGAAGGATCTAAAGTAGATGTAAAGAGTTTCGCATTG
GAAAAATTATTACCCACTGACTTGAATACATTTTTTTCATACGAAGGATC
ACTGACAACTCCCAGATGCAATGAAGTTGTTGCATGGACAGTTTTTAAGG
TGAGTTTCTTTTTTTGTGATAACTTTGTAAATAGGATTATATTTTATTTA
GAAAAAGCATATGATGTCATCGGAACAGTTGGGCGAATTCAGAAAACTTA
TAGGAGGAGGAGAGCCTCTTGTTAATAATTATCGTGACGTTCAGGATTTA
AATGGTAGACAAGTTGATTTCTACTCTGCATGAAGGATAAAGAATACACT
TTCAAATTTAAATTAAAAAATTAATTATAGAATATTTTTATTATGATAAA
ATTTTCTCTGASAATATCAGCTGAGTTATTTGTGTAAATATATATTTTAT
GTTT
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