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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s340 | supercontig | LSalAtl2s340:648475..653143 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006256 >EMLSAP00000006256 ID=EMLSAP00000006256|Name=EMLSAP00000006256|organism=Lepeophtheirus salmonis|type=polypeptide|length=1494bp
MSYTGISKVIDFESLPDPQDKFNLTNLIGEGTFGEVYEATLNDEPERHVA
IKVIDNITDNIEEIEQEYQVLTTHWFHPNIPHFEGLYLKKSSSGDEIWMX
MDLCDGGSVTDLIESLRDHQLPSLSEEEVCYILSEVTHSLNYLHTQKTIH
RDIKGHNIMLTSSGDVKLIDYGIACNIKDTYDKRHTSVGTPYWMAPEVIS
CEQLKTHAYDSRCDVWSLGITAIELAEGKAPLSELHPMRALFQIPRNPPP
ALLKVERWSEDFVEFVNECLIKDYEQRPFIMELMEHPFLQRVPKNPSYIK
NQLQIKIENVKCLYNQSNHIDPTIRRGLLRIKRSADXXLILVDXXASLDD
IDTDTICTYLQMRYNQNKIYTYIGEIIISINPCKTLNIYSAHEMCKYRNK
SKYDNLPHVYAMANSSYHNMIHEKKNQRFIISGESGAGKTMSANWVMKML
VYLGKAPNRNLEDKILQINPILEAFGNAKTPLNGNSSRFAKVVEITYSVN
GKVTGARISVFLLEHSRVTSDRDIREDCNFHIFYYLVKGLNHYGKSNDYY
LNEIHRFLGDQVTPLIKDYDNFIVALKSLGFRENDLETIYTIIASILNIG
DLDFTPVETDDNVGGCKVSNPDILDKIVKLLGVNKEELVDCFQNSTVSTK
GEVITRSNSPEEAKFMRDAFAKGLYSRFFDYIVYSINKLLSYSLNVYGES
NSIGILDIFGFETLETNSFEQLCINTTNEQLFYYFNQVVFRMEKEEYEME
GIFVKMESYSSNHSILDLLLSRPLGLFALIDEECKFPSSTETTLLSKLNN
NLEKFDAYSHPKQEFQLFVIQHYAQKVEYSPNQFLDKNRNFLPPELIAVM
RYSQNEIIRFLFNCPITKTGRLSCSNNSAPVTPDICKMATETHSQTRSQQ
TLSTFFRYSLTDLLKNTLNGTPHFIKCFKPNKFQKPGNLDTSYLMSQLQY
SGVFQTVKXRQIGYPCRLTFAEFLRRYCFLGFSFDERVVATKENCQILML
RLRMDGXALGKTKVFLKYYHVEYLSKLYEYQIRKIIKVQGIVRSWLAKIN
TQKMKWAVLRDLMLAKRFSCRWRYRVKNKMSIEGHSVIEKKMIYKPSKKF
VLTEDIHMNENVKVNAALEIQRHIRGFIVRKKIGPLLAEKIQKMINISDT
SEEKMNEITGELKDEGLSEEEAAKFIQTMFKKNMLKKKSTKTVTRTMQEK
RLLLVDLIQVLHLNNVDTHKYYKYNKLPIELEDVKEVNLENPIVTVSSNI
EKRPPIPTQLITKNEPINNKYIDPNVKRRYSMTHFYSDGGPHENWDSFIN
RHIHRSHKTRGLISKNQDVTPKFLTPQSILLDSAXSELIQRVQNEXSERA
RSRRGSRDSRSSXPSIHCTLSINQSRKGSTDSRGSYPSINFPSSPEKTDS
RTHSFAMESSVKEDKQPNPSFIQQMHTLKKKPDDSFAQVDDDDSGPYDFR
NLLRRTNYAPTDSLRRRIKSSDAELTTIKPSVEGITFDDDCIEL back to topmRNA from alignment at LSalAtl2s340:648475..653143+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006256-702103 ID=EMLSAT00000006256-702103|Name=EMLSAT00000006256|organism=Lepeophtheirus salmonis|type=mRNA|length=4669bp|location=Sequence derived from alignment at LSalAtl2s340:648475..653143+ (Lepeophtheirus salmonis)
AACGCATTTAATGTGATTCTTGTTTAGTCTATAGCCTTTAGTCACTTGCT
AAAGAATGTCTTATACAGGTATAAGTAAAGTAATCGATTTCGAGTCCTTA
CCGGACCCCCAAGACAAATTTAACTTGACCAATTTGATTGGAGAAGGAAC
TTTTGGTGAAGTATATGAAGCAACTTTAAATGATGAGCCTGAACGTCATG
TGGCTATCAAAGTTATTGATAATATTACTGATAACATTGAGGAAATTGAG
CAGGAATATCAGGTTTTGACCACACATTGGTTCCATCCAAATATCCCACA
TTTTGAGGGTCTTTATCTAAAGAAAAGTTCAAGTGGTGATGAAATATGGA
TGGMAATGGATTTATGCGATGGAGGATCTGTTACCGATCTGATAGAATCT
CTTCGTGATCATCAACTGCCAAGTTTATCAGAAGAAGAAGTTTGCTATAT
TTTGAGTGAGGTCACTCATTCTCTCAATTACTTGCACACTCAAAAAACGA
TTCATAGGGACATCAAAGGTACTTCTTTTTATTCTATCTATTTCTTATTT
TCCTATCATTTAATGTAATTTATTTGTACAGGTCACAACATTATGCTGAC
AAGTAGTGGAGATGTAAAACTAATTGATTATGGAATTGCTTGTAATATTA
AGGATACCTATGATAAACGACATACCTCTGTAGGAACGCCATATTGGATG
GCTCCAGAAGTAATATCCTGTGAGCAACTCAAAACGCATGCATATGATTC
TCGATGTGATGTATGGTCTTTGGGTATAACAGCAATTGAACTGGCTGAAG
GAAAAGCTCCATTATCTGAGCTTCATCCAATGAGGGCTCTTTTCCAAATT
CCAAGAAATCCACCTCCAGCTCTTTTAAAAGTTGAGCGATGGTCAGAAGA
TTTCGGTAATTTTAGTTATTATTCTGTGCATTTGTCAACTTATGACATGT
ATCATTTTCTTTAATCAATAGTTGAATTTGTTAATGAATGTCTGATCAAA
GACTATGAGCAAAGGCCTTTTATAATGGAACTCATGGAACATCCATTTCT
CCAAAGAGTCCCGAAAAATCCTTCATACATAAAAAATCAATTGCAAATCA
AAATTGAGAATGTCAAGTGTTTATATAACCAAAGTAATCATATTGATCCA
ACAATCCGGCGAGGATTACTACGAATTAAGAGATCCGCTGATCNTWTTCT
AATTTTGGTTGATGWTRTAGCCTCTCTTGATGATATTGATACTGACACTA
TTTGTACTTACTTACAAATGAGGTATAATCAAAACAAGATCTACACTTAT
ATTGGCGAAATCATTATTTCAATTAATCCCTGTAAGACTTTAAATATTTA
TTCAGCGCATGAAATGTGTAAGTATCGAAATAAGTCGAAGTATGATAATC
TGCCGCACGTCTATGCCATGGCAAATTCATCCTATCATAATATGATACAC
GAGAAAAAGAATCAGAGATTTATTATTTCTGGAGAATCCGGAGCAGGAAA
GACAATGAGTGCTAACTGGGTTATGAAAATGCTTGTTTATCTCGGAAAAG
CTCCAAATCGGAATTTGGAGGATAAAATCCTACAGATCAATCCCATTTTA
GAAGCCTTCGGGAATGCCAAAACTCCACTTAATGGGAATTCTAGTCGCTT
CGCTAAAGTTGTAGAAATCACTTACTCAGTAAATGGTAAAGTCACAGGCG
CACGTATTTCTGTGTTCTTGTTGGAACATTCCAGAGTGACAAGTGATCGT
GACATTCGAGAGGATTGCAATTTTCATATATTTTACTATTTAGTAAAGGG
TCTAAATCACTATGGCAAGTCAAATGATTATTATTTAAATGAGATCCATC
GATTTTTAGGTGATCAAGTAACACCATTGATTAAAGACTATGATAATTTT
ATAGTGGCCTTAAAATCCTTGGGTTTCCGAGAAAATGACTTAGAAACAAT
TTATACTATTATAGCTAGTATACTCAACATAGGCGATCTTGATTTTACAC
CAGTTGAAACTGATGACAATGTGGGTGGTTGTAAAGTATCTAATCCTGAT
ATATTAGACAAAATAGTTAAACTCCTCGGTGTGAACAAGGAAGAATTAGT
TGACTGCTTCCAAAATTCTACTGTATCAACCAAGGGAGAAGTCATTACTC
GGAGCAATTCTCCTGAAGAAGCAAAATTTATGCGAGATGCTTTTGCGAAA
GGACTCTACTCACGATTCTTCGATTACATTGTTTATTCCATTAATAAACT
ATTGAGCTACTCACTAAATGTTTACGGAGAGTCTAATTCAATTGGTATTT
TAGATATTTTTGGATTTGAGACCCTTGAGACTAATTCCTTTGAGCAACTC
TGCATTAATACAACAAATGAGCAATTATTCTATTACTTTAATCAAGTGGT
ATTTCGTATGGAAAAAGAAGAGTATGAAATGGAGGGTATATTTGTCAAAA
TGGAAAGTTATTCAAGTAATCACAGTATTTTAGATCTTTTACTATCACGT
CCACTTGGACTTTTTGCTCTCATTGACGAGGAATGTAAGTTTCCATCCTC
AACAGAAACGACATTACTTTCGAAGTTAAACAATAACCTTGAAAAGTTTG
ATGCTTATTCACACCCCAAACAGGAATTCCAACTTTTCGTTATTCAGCAC
TATGCTCAAAAAGTTGAGTACTCTCCGAATCAATTCCTCGATAAAAATAG
GAATTTCCTTCCTCCAGAGCTGATTGCTGTCATGCGGTACTCGCAAAATG
AAATAATCCGATTTTTGTTTAACTGTCCAATTACAAAAACAGGTCGTCTT
TCATGCTCTAATAATTCGGCKCCAGTCACACCAGACATATGCAAAATGGC
TACAGAAACCCATTCACAAACTCGTTCGCAACAAACTCTCTCCACTTTCT
TTAGGTATTCACTAACTGACCTACTCAAAAATACTTTAAATGGCACACCA
CATTTTATCAAATGCTTTAAGCCAAATAAATTTCAAAAGCCAGGAAATTT
GGACACTTCCTATCTAATGAGCCAACTACAATACTCCGGTGTTTTTCAAA
CGGTAAAAATKCGTCAAATAGGCTATCCATGTCGACTAACATTTGCTGAG
TTCCTTCGCCGATACTGCTTTTTGGGTTTTTCCTTCGATGAAAGAGTTGT
GGCAACAAAAGAAAATTGTCAAATTCTTATGCTGAGATTACGAATGGATG
GGMATGCTCTTGGTAAAACCAAAGTTTTCTTAAAGTATTATCATGTAGAA
TACCTATCTAAGCTTTATGAGTATCAAATACGAAAAATTATTAAAGTCCA
AGGAATTGTTCGATCCTGGCTTGCAAAAATCAATACACAAAAGATGAAAT
GGGCAGTTCTAAGAGATTTGATGCTTGCTAAAAGATTTAGCTGTAGATGG
AGATACCGAGTCAAAAATAAGATGTCCATTGAAGGACATTCCGTAATAGA
GAAGAAAATGATATATAAGCCGTCCAAAAAATTTGTACTCACTGAGGATA
TCCATATGAATGAAAATGTCAAAGTAAATGCTGCGTTAGAGATTCAAAGA
CATATTCGAGGCTTCATTGTAAGAAAAAAGATTGGCCCACTTTTAGCAGA
AAAAATTCAAAAAATGATAAATATTTCAGACACATCAGAAGAAAAAATGA
ATGAGATAACAGGGGAACTAAAAGATGAAGGACTATCTGAGGAGGAGGCC
GCCAAGTTCATTCAGACCATGTTTAAGAAAAACATGCTCAAGAAAAAGTC
AACAAAGACAGTAACGAGAACGATGCAAGAGAAACGACTTTTATTAGTGG
ATCTCATTCAAGTACTTCACTTGAATAATGTCGACACTCATAAGTACTAT
AAGTATAACAAACTACCAATTGAACTCGAAGATGTAAAAGAGGTGAACCT
AGAAAACCCCATAGTTACAGTGTCAAGTAACATAGAAAAAAGACCCCCTA
TTCCAACTCAGCTCATAACAAAAAACGAACCTATCAATAATAAATATATC
GATCCTAATGTTAAACGTCGTTATTCTATGACACACTTTTATTCTGATGG
AGGTCCTCATGAAAATTGGGATAGTTTTATCAACCGTCACATTCATAGAT
CCCATAAAACTCGGGGTTTGATTTCCAAGAATCAAGATGTAACGCCCAAG
TTTCTTACTCCTCAGAGTATCCTCTTAGACTCGGCTTRCTCAGAACTGAT
TCAGAGAGTACAAAATGAGGMATCTGAGAGAGCAAGGAGTCGAAGGGGAT
CACGAGACTCCAGAAGCTCTAKCCCTAGTATCCACTGTACCCTTTCAATA
AATCAGAGTCGAAAAGGTTCAACTGACTCAAGAGGATCTTACCCTAGCAT
TAATTTCCCCTCATCTCCTGAAAAAACTGATTCCCGAACACATTCTTTCG
CCATGGAATCATCCGTGAAAGAAGATAAACAACCAAATCCTTCTTTTATT
CAACAAATGCATACTCTAAAAAAGAAACCGGATGATTCATTTGCTCAAGT
AGATGATGACGATTCAGGGCCTTATGATTTTAGAAATTTGCTTCGACGTA
CTAATTATGCACCAACAGACTCCTTGCGTCGACGGATCAAGAGTTCTGAT
GCAGAATTAACTACTATTAAACCTTCTGTAGAGGGTATTACTTTTGATGA
TGATTGTATTGAACTATAG back to top
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