EMLSAT00000006266, EMLSAT00000006266-702113 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006266
Unique NameEMLSAT00000006266-702113
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s341supercontigLSalAtl2s341:189511..192546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006266 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006266EMLSAG00000006266-689032Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027350EMLSAE00000027350-736278Lepeophtheirus salmonisexon
EMLSAE00000027351EMLSAE00000027351-736279Lepeophtheirus salmonisexon
EMLSAE00000027352EMLSAE00000027352-736280Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774173auto774173Lepeophtheirus salmonispolypeptide
EMLSAP00000006266EMLSAP00000006266Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006266

>EMLSAP00000006266 ID=EMLSAP00000006266|Name=EMLSAP00000006266|organism=Lepeophtheirus salmonis|type=polypeptide|length=547bp
MGTFDNRHRKLVIDTPLWKSRRGSGLGASSQEDSDYWKXLEFPVTIQESG
PIHYIQISPSKPHWVALTGSLKVQLFDSDSDALLKTLSKGKERVYGAKFR
DEATLGLGTENGAVKVYSVGSKALLRDMNTGHTGPVQRIAFLTDKKHISS
FSDDKTTILWDIPTGESVFKGEHNDYVRSGDASPVSSHLYASGSYDHTIK
LWDKRQSTPVVTLDHGSPVEDILFLQGGALLASAGGHHVILWDLTAGKYL
AKMSPHSKTITSLSTSNNGTRIVSASLDRKVVFSDITSTFKPVFSLSSPS
PLLRVAVSPDDKLICTGSSDGLVQFLHRRAPEISESELLFMKRKEKNKYL
THMNFKPSVGDMVVPEYEYAHGRENKFDMYLRKFEFSKALDSVLRMYIQK
KHPQYTYSVLKELKRRKMLSLAIAGRDDKSLGLLLTFATNNVNKMEYASL
IHEVIEIVADLYADKFGVYPTLDKAFDLIRKKVEREANNMQTLMELKGSL
SMMLSAAKTSEPVLRYEENELRLANKGKKGKTSSKVPMAWEKMLLDI
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mRNA from alignment at LSalAtl2s341:189511..192546+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006266-702113 ID=EMLSAT00000006266-702113|Name=EMLSAT00000006266|organism=Lepeophtheirus salmonis|type=mRNA|length=3036bp|location=Sequence derived from alignment at LSalAtl2s341:189511..192546+ (Lepeophtheirus salmonis)
AAAAATTACCGTTGCAATACTAAAAAATAGATGACCGATTCAGAGGAATC
AAAACAAAGTTTGTTGTGAATTTTAGCTCATTGAGTTAAAATTTTTACCA
CGTGTTGTTGACTTTGTTTTTCTTTAGTTCTCTGCATTGGATTTAATTGC
TAAAAAGGATGGGGACTTTTGACAACCGTCATCGGAAGTTGGTGATTGAC
ACTCCTCTCTGGAAATCTCGAAGGGGCTCAGGTCTAGGAGCATCATCGCA
AGAGGACTCTGATTATTGGAAGGKCCTTGAGTTTCCCGTAACGATCCAAG
AAAGTGGCCCCATTCACTACATTCAGATTTCTCCTTCTAAGCCTCATTGG
GTAGCACTCACGGGCTCCTTGAAAGTTCAACTCTTTGACTCTGACTCCGA
TGCACTTCTTAAAACACTTTCCAAAGGGAAGGAGCGTGTCTACGGGGCCA
AGTTCAGGGATGAAGCCACATTAGGTAAATATTTTTATATAAAATGCCTT
ATTTATTAATTTTACTAACTCTTTACTCTTCGTCAACAGGGTTAGGAACG
GAGAATGGAGCAGTCAAAGTATATAGCGTGGGATCCAAGGCCCTATTGCG
TGATATGAATACGGGACACACTGGCCCTGTTCAAAGAATCGCTTTTCTAA
CGGACAAGAAACACATTTCATCCTTCTCGGATGATAAAACAACAATATTG
TGGGACATCCCCACGGGGGAGTCTGTTTTTAAAGGAGAACATAATGACTA
TGTCCGATCGGGAGATGCTTCTCCAGTGTCATCCCATCTCTACGCCTCTG
GTTCTTATGATCACACAATTAAACTATGGGATAAACGTCAATCCACTCCT
GTTGTGACACTAGACCACGGCTCTCCTGTTGAAGACATACTATTTCTACA
AGGTGGAGCCCTATTAGCATCTGCTGGAGGTCATCACGTCATTCTCTGGG
ATCTTACAGCTGGAAAGTATTTAGCGAAAATGTCTCCGCATTCCAAAACC
ATTACGTCTCTCTCCACGTCCAACAACGGAACTCGAATTGTTAGCGCTTC
ATTAGACAGAAAAGTTGTTTTTTCGGATATTACTTCTACCTTCAAACCCG
TCTTTTCATTATCCTCCCCATCCCCGTTATTAAGAGTTGCCGTGTCTCCT
GATGACAAGTTGATATGTACTGGCTCGAGCGACGGACTCGTTCAGTTCCT
ACATCGCCGCGCTCCAGAAATATCAGAGAGTGAACTTTTATTCATGAAAC
GCAAAGAAAAAAATAAATACTTGACTCATATGAATTTCAAGCCATCAGTG
GGTGATATGGTTGTGCCTGAATATGAATATGCACATGGGCGGGAAAATAA
GTTTGACATGTATCTCCGTAAATTTGAATTCTCGAAAGCTCTTGACTCCG
TTTTAAGAATGTACATTCAAAAGAAGCATCCTCAATATACATATAGTGTT
CTAAAGGAACTTAAAAGGAGAAAAATGCTATCACTTGCTATTGCAGGGCG
TGATGATAAATCCCTAGGACTCTTGCTCACATTTGCCACAAATAATGTTA
ACAAAATGGAATACGCATCCCTTATTCACGAAGTCATTGAAATTGTGGCT
GACCTATATGCTGATAAATTTGGTGTATATCCCACATTGGATAAAGCCTT
TGATCTGATTAGAAAGAAGGTCGAGAGAGAGGCGAACAATATGCAAACTC
TTATGGAGCTTAAAGGCAGTTTAAGTATGATGTTGTCTGCTGCAAAAACA
TCTGAGCCGGTACTGCGTTACGAAGAAAATGAATTGCGATTGGCCAACAA
AGGCAAGAAAGGAAAGACATCATCTAAAGTTCCCATGGCATGGGAAAAAA
TGTTATTAGATATTTAGTTATCTGGAGCTTTTTGACTCCACGTATTCAGT
TCATAAAATTTTTGAATAAAATTATTTCGATTATGTAACATTAAAAAAAA
ATTCGTTTACATTGCACAAATGGATAAACCCTATATGATAATTAAGATGA
TACATATTTGATTAAGTTGAATCAAGTACCCATAATACAGGGTCCGCGCT
CATCGTTTTTGTAAGTGAAGGAGCCTTTTTTTTTTGCTGCTGCTATATGA
TAATTGTAAATTTTTTAAAAGTGGGGTACCCCCTGTAAAAGCTGGAATAT
TTTAATATGATTAATCATTTGGGGGTACTGCAAATTGCTCTTAAATTATA
AAAAATGTATTGTCAGAATGAAAGAGATAGAAGGCAATCGATGTCAACAA
TTTGAAAGGAGCCATTTCTGTCCCAAATTTAGTGTCATCAATCAAATTAA
GGTTCTGGAATGTAGTAAATATTCTTAGTCATCACAAATCATTCTCGAAA
TCTTAATATACAGCCTATAATTGACCAAAATATTGGGTTGTATATATATG
TAATATTTAAAAACTATTCGTGTACATAACAAAAATTGGCCAAACTTATA
TAATTATACATATTTTATAAAGTACAATTAGGTTTACAGAATAGTTCTAG
GAAAATCGCCCGCCATTTAATAAAAGTTTCAAATTGTATAATACTTTAAT
TAATAAACATCGATTAATTAGTTTCAAATGGATCCGAAATTGCATTTGCT
ATCATTGTGAATTTTAAATACTTTTCAATGTATTTACTTATGAGTTCTAT
TTGAAAATAACATCATATTTAAAAAAAATATATATTATTTACATTTGAAC
TTTTATTAGCTACGTTGCTAGTATATGTTCTAAAAAATGCAATATCACTA
TTTTATCACTGTCTCTACCGAGTTTAAAAACTATATTTTAGTTAATTCAA
TTTTTTTACGTTTTAAATCTAAATCTAATATAATAATTAGGTTATATTTA
AATTGGACTCAAAAGTAATTAGAGTGAATATCATTGCCGAAGGCCTCCAT
TTTGAGGGCCAAGTTATATATCAATAAAAACCCATTTTCATTCATATTAA
GTAAAATTATTTGATATCTGTATGGGATCAACAAATAAAAGGACTATAAC
TTTTCTGTTTATCAAAATTTAATAATTCAAATGCCT
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