EMLSAT00000006281, EMLSAT00000006281-702128 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006281
Unique NameEMLSAT00000006281-702128
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s341supercontigLSalAtl2s341:813147..814283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006281 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006281EMLSAG00000006281-689047Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027413EMLSAE00000027413-736341Lepeophtheirus salmonisexon
EMLSAE00000027414EMLSAE00000027414-736342Lepeophtheirus salmonisexon
EMLSAE00000027415EMLSAE00000027415-736343Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779807auto779807Lepeophtheirus salmonispolypeptide
EMLSAP00000006281EMLSAP00000006281Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006281

>EMLSAP00000006281 ID=EMLSAP00000006281|Name=EMLSAP00000006281|organism=Lepeophtheirus salmonis|type=polypeptide|length=317bp
MEAPEGTHLFPLSPTTRRRHRGRGGXLDNMXAXTITNNPSFLATTPDHDS
DVCMLTPSPDEMVIQARGRRSTPLIFSPDVHLTPYRGKRATSGRLLLLPT
RSSPRKRLTLTDSPPSPVKRSPITKKFRLESVESVSCALKGLSPDQLVSL
VSRLMEKKPELAEDIRQIMPSPDLAPCEERLNYLKRNVYKALPNTRLESK
TDSMAYNRVATHLLAFKKTLIDQGKVLLEANQWPALLDYSLMAWAYVRTT
PVWDNPPHNNIRKQCFKSLSANCMHSLKRGEWSDEVYLDIKNKMIPLKQD
SEEIITCLKYIDQLYNM
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mRNA from alignment at LSalAtl2s341:813147..814283-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006281-702128 ID=EMLSAT00000006281-702128|Name=EMLSAT00000006281|organism=Lepeophtheirus salmonis|type=mRNA|length=1137bp|location=Sequence derived from alignment at LSalAtl2s341:813147..814283- (Lepeophtheirus salmonis)
ATGGAAGCTCCGGAAGGAACGCACTTGTTTCCTCTCTCGCCTACAACTCG
GCGAAGACATCGTGGAAGAGGTGGAGMGCTGGATAATATGKCTGCCRCTA
CCATCACCAACAATCCATCCTTCCTCGCCACGACTCCGGATCATGGTAGT
AATTTTAATTGAAATATTAATCGACTAATGTATCTTTTGTGTATCAGATT
CTGATGTCTGTATGCTGACTCCAAGCCCTGACGAAATGGTGATTCAAGCC
CGTGGCCGTCGTTCCACTCCCCTCATTTTTAGTCCTGATGTCCATTTAAC
CCCTTATAGAGGTAAACGAGCCACTTCTGGAAGACTCCTTCTCCTACCCA
CTCGATCTTCACCTCGTAAACGACTCACACTCACAGATTCTCCTCCCAGT
CCCGTTAAAAGGAGTCCCATCACCAAGAAATTCCGGCTGGAGTCAGTGGA
ATCTGTTTCATGTGCACTGAAAGGCTTATCCCCGGATCAATTGGTCTCTC
TTGTCTCCAGACTCATGGAGAAGAAGCCAGAGCTTGCAGAAGATATACGA
CAAATAATGCCGTCCCCGGATCTCGCTCCCTGTGAAGAACGCCTCAACTA
CTTAAAGCGCAATGTCTATAAAGCCCTCCCCAATACTCGTTTAGAGTCTA
AAACGGACTCCATGGCTTATAATCGAGTCGCCACTCATTTGCTTGCTTTT
AAAAAAACACTTATTGATCAAGGAAAGGTGCTTCTTGAGGCCAATCAATG
GCCTGCACTCCTGGATTACTCTCTTATGGCATGGGCTTATGTACGGACAA
CTCCGGTATGGGATAATCCTCCTCACAATAATATTCGAAAGCAATGCTTT
AAATCCTTATCTGCTAATTGCATGCACTCTTTAAAGAGGGGAGAGTGGAG
CGATGAGGTTTACCTTGACATAAAGAACAAGTACGTTGCTTTTATCCATT
CTATTATATATACTTAAATATCTAGTAAATTGAATTTAAATCCTTTTTTT
CTTTCTTTTTTCAATTGAAACCCTGATCTTCATTAATATTTATTGTTCCT
TATTTTTTTAGAATGATTCCACTCAAGCAGGACTCAGAAGAAATTATCAC
GTGCTTGAAATACATTGACCAATTATACAATATGTAA
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