EMLSAT00000006307, EMLSAT00000006307-702154 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006307
Unique NameEMLSAT00000006307-702154
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s343supercontigLSalAtl2s343:297226..297764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006307 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006307EMLSAG00000006307-689073Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027527EMLSAE00000027527-736455Lepeophtheirus salmonisexon
EMLSAE00000027528EMLSAE00000027528-736456Lepeophtheirus salmonisexon
EMLSAE00000027529EMLSAE00000027529-736457Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776022auto776022Lepeophtheirus salmonispolypeptide
EMLSAP00000006307EMLSAP00000006307Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006307

>EMLSAP00000006307 ID=EMLSAP00000006307|Name=EMLSAP00000006307|organism=Lepeophtheirus salmonis|type=polypeptide|length=138bp
MADKTGYDMFVIEQXLKAKIHFPREHHPTLMVRLREHYCPLLWVREENMS
HYMELATKANTTQIALAPILDSINRLKLIDVDPNDQDDKKNIPKLQMDDD
DQKSEIGSGSMPGSPSVEDIVDLKPNIEELNIELNISN
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mRNA from alignment at LSalAtl2s343:297226..297764-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006307-702154 ID=EMLSAT00000006307-702154|Name=EMLSAT00000006307|organism=Lepeophtheirus salmonis|type=mRNA|length=539bp|location=Sequence derived from alignment at LSalAtl2s343:297226..297764- (Lepeophtheirus salmonis)
ATGGCGGATAAAACAGGCTACGACATGTTTGTGATTGAGCAGKATTTGAA
GGCTAAAATCCACTTTCCACGGTAATAGTAGAGTAATTATTTGCACATGT
AATGTATAAACAAGTCATTTATGTATCCTAGAGAGCATCATCCTACTTTA
ATGGTACGTCTTCGAGAACATTATTGTCCCTTGCTATGGGTCAGAGAAGA
AAATATGAGTCATTATATGGAATTAGCAACAAAAGCAAACACAACTCAGA
TAGCTTTAGCTCCGATACTTGACTCAATTAATCGGCTCAAATTGATTGAT
GTTGATCCAAATGATCGTTATGAGAAAATAGAACTTGTAGACAATGATGT
TCCTGATAATTTTTTTATTCATTGGAAGAAGACGATAAGAAAAATATCCC
TAAACTACAAATGGATGATGACGATCAAAAATCTGAAATAGGGAGTGGCT
CTATGCCTGGAAGTCCATCTGTGGAAGACATTGTGGACTTGAAACCAAAT
ATTGAGGAATTGAATATAGAATTGAATATTTCTAATTAA
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