EMLSAT00000006315, EMLSAT00000006315-702162 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006315
Unique NameEMLSAT00000006315-702162
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s343supercontigLSalAtl2s343:81279..82227 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006315 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006315EMLSAG00000006315-689081Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027572EMLSAE00000027572-736500Lepeophtheirus salmonisexon
EMLSAE00000027573EMLSAE00000027573-736501Lepeophtheirus salmonisexon
EMLSAE00000027574EMLSAE00000027574-736502Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771623auto771623Lepeophtheirus salmonispolypeptide
EMLSAP00000006315EMLSAP00000006315Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006315

>EMLSAP00000006315 ID=EMLSAP00000006315|Name=EMLSAP00000006315|organism=Lepeophtheirus salmonis|type=polypeptide|length=233bp
MSESVVIITGSAKGLGKGFAQTLLKRGCFVALSDVSEEDGHQTLKEFQEV
FGKDKVIFVQCDVRSKDDFERLWKETQRIFGKNVNVLVNNAGVNGNHASC
LDINLYGVMNGVEIAHKEMQSAGSGLIINIGSMAGLVPNYKIMGNNYFVS
KRGVVTLTRALGVASKNSGIKSSVLCPFFVDTDLANTPDIKKEVSRLGGQ
ILSVERVVXXXXXGKYSGYQKGSKSTWRSNTVC
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mRNA from alignment at LSalAtl2s343:81279..82227+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006315-702162 ID=EMLSAT00000006315-702162|Name=EMLSAT00000006315|organism=Lepeophtheirus salmonis|type=mRNA|length=949bp|location=Sequence derived from alignment at LSalAtl2s343:81279..82227+ (Lepeophtheirus salmonis)
AACAATGTTGATTAAATATATTTTGCCATGAGCGAGTCTGTTGTCATCAT
CACTGGCTCTGCCAAAGGATTGGGGAAAGGATTTGCTCAAACATTATTGA
AGGTCTGTATAAAAACAAGCTCCCTTTTTTTAATATAGTATGAATTCGTT
ACCGTTTATTTAGAGAGGTTGTTTTGTGGCATTATCGGATGTGTCGGAAG
AGGATGGMCACCAAACCTTGAAGGAGTTTCAAGAAGTCTTTGGTAAAGAT
AAGGTAATTTTTGTTCAATGTGATGTTCGATCCAAGGATGATTTTGAGAG
ATTATGGAAGGAAACCCAAAGGATTTTTGGCAAGAATGTGAATGTTTTGG
TGAATAATGCTGGAGTCAATGGAAATCATGCTAGTTGCCTAGACATTAAT
CTTGTAATATAGCAGTATATATTATAGAAGGGATTATGTCTTCATTTATT
TTAGTATGGAGTGATGAATGGAGTGGAGATTGCCCATAAAGAAATGCAAT
CTGCGGGTAGTGGGCTCATAATCAATATTGGATCCATGGCTGGCCTCGTT
CCAAATTACAAAATAATGGGAAACAATTACTTTGTATCCAAACGTGGCGT
TGTCACCTTGACTCGTGCCTTGGGAGTTGCATCAAAGAATTCAGGGATCA
AATCCAGTGTTCTTTGTCCCTTTTTTGTTGACACGGACTTGGCAAATACT
CCGGATATCAAAAAGGAAGTAAGTCGACTTGGAGGTCAAATACTGTCTGT
TGAACGTGTCGTTGNNNNNNNNNNNNNNGGCAAATACTCCGGATATCAAA
AAGGAAGTAAGTCGACTTGGAGGTCAAATACTGTCTGTTGAACGTGTCGT
TGAGGCATTTGACCTATTATATGAAAATGCGGATGTGTATAATGGTAAAG
CCCTTGTTGTGACAACAGATTCTCCTTTTTTTACCATGCCCATCTATAA
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