EMLSAT00000006317, EMLSAT00000006317-702164 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006317
Unique NameEMLSAT00000006317-702164
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s343supercontigLSalAtl2s343:98032..98994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006317 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006317EMLSAG00000006317-689083Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027581EMLSAE00000027581-736509Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772084auto772084Lepeophtheirus salmonispolypeptide
EMLSAP00000006317EMLSAP00000006317Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006317

>EMLSAP00000006317 ID=EMLSAP00000006317|Name=EMLSAP00000006317|organism=Lepeophtheirus salmonis|type=polypeptide|length=320bp
MENFLYGINNYVYSTFTSLIAFNYYIGDTLVSSLLYCVQVVTSVFTAIAD
ACVVLIQDLDVFLSELFEYILTIKQSLAELGDNLEFKSPISPIIDHNVVL
FNAITSIVSDFFYGIGHNILDSLSLIPNTFHFMTVFIQSLYSICCRKEVL
LGALISFLIGYVLLKSLFQIRRRVPSQVLEQFTSFLSLAIYSIILRGGSC
TLSIIRCILRAAXLTLHHIHLPSFHYAATDPIELEESSKRQQLRSMLDDI
TGREDVQVLLEQLEREDKLCVVCQDQEKCMVIMPCRHLCICQRCKELLLQ
GTRSCPICRKKIGHTIKAYF
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mRNA from alignment at LSalAtl2s343:98032..98994-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006317-702164 ID=EMLSAT00000006317-702164|Name=EMLSAT00000006317|organism=Lepeophtheirus salmonis|type=mRNA|length=963bp|location=Sequence derived from alignment at LSalAtl2s343:98032..98994- (Lepeophtheirus salmonis)
ATGGAGAATTTTCTATATGGAATCAATAATTATGTGTATTCGACCTTCAC
TTCTCTCATAGCCTTCAATTATTATATTGGAGACACTTTAGTAAGCTCCT
TACTCTATTGTGTTCAAGTTGTGACATCCGTGTTTACTGCCATTGCTGAC
GCATGTGTCGTCTTGATTCAAGATCTAGATGTCTTCCTATCAGAGCTATT
TGAATATATTCTCACCATTAAGCAATCCCTCGCGGAACTAGGCGATAACT
TAGAGTTCAAATCTCCAATTTCTCCCATTATTGATCATAACGTTGTATTA
TTCAATGCCATCACTTCCATTGTATCTGACTTTTTCTATGGTATTGGACA
TAATATTCTCGACTCATTGTCCCTCATACCCAATACATTTCACTTTATGA
CAGTCTTTATCCAATCGCTATATAGTATATGTTGCCGAAAAGAAGTTCTT
CTGGGTGCTCTGATTTCATTTCTCATTGGATATGTTCTATTGAAATCCCT
GTTTCAAATAAGGAGACGCGTTCCATCTCAAGTACTGGAACAATTTACAT
CCTTTCTCTCATTGGCCATCTATTCTATAATTCTTCGTGGAGGCTCTTGC
ACACTGAGTATTATTCGTTGCATTCTCAGAGCGGCTGMACTTACTCTACA
CCATATCCATCTCCCAAGTTTTCATTATGCAGCTACGGATCCCATTGAAC
TTGAAGAGAGTTCGAAAAGGCAGCAGTTGAGGAGTATGCTTGATGATATA
ACAGGTAGGGAGGATGTTCAAGTTCTCCTGGAACAGTTGGAACGAGAGGA
TAAACTATGTGTTGTATGCCAAGATCAGGAAAAATGTATGGTTATTATGC
CTTGTAGGCATCTATGTATTTGCCAAAGGTGTAAGGAACTCTTACTCCAA
GGAACGAGGTCTTGTCCCATTTGTAGAAAAAAAATTGGACACACCATTAA
AGCCTATTTCTAA
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