EMLSAT00000006352, EMLSAT00000006352-702199 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006352
Unique NameEMLSAT00000006352-702199
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s346supercontigLSalAtl2s346:685315..686337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006352 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006352EMLSAG00000006352-689118Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027750EMLSAE00000027750-736678Lepeophtheirus salmonisexon
EMLSAE00000027751EMLSAE00000027751-736679Lepeophtheirus salmonisexon
EMLSAE00000027752EMLSAE00000027752-736680Lepeophtheirus salmonisexon
EMLSAE00000027753EMLSAE00000027753-736681Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779328auto779328Lepeophtheirus salmonispolypeptide
EMLSAP00000006352EMLSAP00000006352Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006352

>EMLSAP00000006352 ID=EMLSAP00000006352|Name=EMLSAP00000006352|organism=Lepeophtheirus salmonis|type=polypeptide|length=192bp
MDLSSPGEVTSSPNPSSTNKGYDYLLKVLLVGDSDVGKQEILSGINRWLK
EVDDHAPGIPKVLIGNRLHLAFRRQVDQNEAEDYAEKNSMGFFEVSPLVN
FNISESFIELARMALKRNGMERLWRLNKVSSLYELCAHTIVNRTSVYGID
KLPLPQSVQQNLKSYXXLFQPPVDKIPLYHLPLLWVLALTSL
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mRNA from alignment at LSalAtl2s346:685315..686337-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006352-702199 ID=EMLSAT00000006352-702199|Name=EMLSAT00000006352|organism=Lepeophtheirus salmonis|type=mRNA|length=1023bp|location=Sequence derived from alignment at LSalAtl2s346:685315..686337- (Lepeophtheirus salmonis)
ATGGATCTAAGTAGTCCTGGAGAAGTAACTTCTTCCCCTAACCCTTCTTC
TACAAATAAGGGATATGATTATTTGTTAAAAGTCCTCTTAGTGGGCGATT
CCGATGTTGGAAAACAAGAGATTCTTTCAGGTTTGCAAGATGGGGCCTCG
GATTCCCCTTTTTCTTGCTCGACTTCCGCCAATTCTGGAGCAGGTAAGGT
TCATTGTATCCTTTATACCCTTTTTCATTGTTAGCTTTGATATTTAGCTT
ATAAGACTACCATGATACTCATTGATGGAAAAAGAGTGAAACTTCAGCTA
TGGGACACAAGTGGACAAGGGAGATTCTGCACCATAATCAGATCTTACTC
CCGTGGAGCACAAGGAATATTACTAGTGTATGATATAACCAACAAATGGT
CATTTGAAGGCATCAATCGCTGGCTAAAAGAAGTGGATGATGTGAGGCGT
TCATTATAATTATTAATGATAATTGATCAAATACTAAAACTATGTTTCTG
AATCTATCTATAGCATGCTCCTGGAATTCCTAAGGTTTTAATAGGAAATA
GATTGCATTTAGCTTTTAGAAGACAAGTCGACCAAAATGAAGCTGAGGAC
TACGCTGAGAAAAACTCCATGGGATTTTTCGAAGTCTCTCCTCTAGTTAA
TTTTAACATATCAGAAAGTTTTATTGAGTTAGCTCGAATGGCCCTCAAAC
GAAACGGAATGGAGAGATTATGGAGGTTAAATAAAGGTAGGGAGGAAAAC
AAAAACAATATTACTGAACCTCTATTTTGAAAAAGGTTTGCAACATAAGT
AATAATTCAATGATTAATTATATTTTTAGTTTCTTCTTTATACGAACTCT
GTGCACACACCATTGTCAATCGAACATCAGTGTACGGAATAGATAAACTT
CCATTGCCTCAAAGTGTTCAACAAAATCTCAAATCCTATGNNNNNCTCTT
TCAACCTCCAGTGGACAAAATTCCTCTATATCATCTTCCTCTTTTGTGGG
TTCTGGCTCTTACAAGTCTTTAA
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