EMLSAT00000006369, EMLSAT00000006369-702216 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006369
Unique NameEMLSAT00000006369-702216
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s348supercontigLSalAtl2s348:56470..57649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006369 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006369EMLSAG00000006369-689135Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027814EMLSAE00000027814-736742Lepeophtheirus salmonisexon
EMLSAE00000027815EMLSAE00000027815-736743Lepeophtheirus salmonisexon
EMLSAE00000027816EMLSAE00000027816-736744Lepeophtheirus salmonisexon
EMLSAE00000027817EMLSAE00000027817-736745Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770869auto770869Lepeophtheirus salmonispolypeptide
EMLSAP00000006369EMLSAP00000006369Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006369

>EMLSAP00000006369 ID=EMLSAP00000006369|Name=EMLSAP00000006369|organism=Lepeophtheirus salmonis|type=polypeptide|length=119bp
MASLKVFSIFLTITTLLSQSNGQDCLTNNNATCVFPFIYGERIYAGCTTA
NNGGIFWCATSLYDTGLAKDYGSCADSCRDEISIPYDGCRTVSGRSCHFP
FLYKNIEYHNCTLAGDTQA
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mRNA from alignment at LSalAtl2s348:56470..57649-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006369-702216 ID=EMLSAT00000006369-702216|Name=EMLSAT00000006369|organism=Lepeophtheirus salmonis|type=mRNA|length=1180bp|location=Sequence derived from alignment at LSalAtl2s348:56470..57649- (Lepeophtheirus salmonis)
AAGAAGTCTCAAAAATTTGATTTCACACTATTATCGAAGACTTAACTCGG
GAAACATGGCATCCTTGAAAGTATTTTCCATATTCTTGACGATCACTACT
CTTTTGTCACAGAGCAATGGACAAGGTAATAACATAAATACTTAGATTTT
TTTCTCACTTGTATATATGTCGATAACAAAGAGGCATCCAGAATCCCTTA
TCAGTAAATTTGTGAAAATTGAGAAAGTCCTTACGAGTATACATTTAAAA
AAGTGGTTATGTTGGTAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNATGATGAATTAGTGTTCCCAAAT
TTTCCTGTCTATTTTGAAAATTGGAACGTTCTAGTGAGCAYGAGGTTTAT
TTATTAATTCAAGAGATATGTCAACATTCAAATCTTTACAGATTAGACAT
WAGTAGAGTTGCAGCRTTTGCAGTATGAATGTAATTGCTATCTGGTTCAT
CTTTTTCATTCTATAAACTATTTTTAATGGAACAAAAAATAAAAAACAAT
AATTATATAACTAATATAAATACTATTAASAACTGTTATTCTTCTTTCTT
CCTTAAAATCAACTTTATTTCAACATMTACTTTTACTACAACCACTATTA
TTCCAACAACAACAACTACAACATCAGGTATGGAAATATGCTCACTCATA
TGTAATTTATGTAAGACGTAATCTGTTGAGCATTATTGTAATATTTCTTT
TATTTTGTAGACTGTTTAACAAACAATAATGCTACTTGCGTATTCCCCTT
TATTTATGGAGAAAGGATCTATGCTGGTTGCACAACTGCTAATAATGGAG
GCATTTTTTGGTGTGCTACTTCTCTTTATGACACAGGCCTTGCTAAAGAT
TATGGAAGTTGTGCAGATTCTTGCAGAGGTATGTTCAAGAAAAAGTTACT
CACCTGGTCATAACAAATACACTTTTATCTTTGTTTTTTCTCTAGATGAA
ATTAGTATTCCCTATGATGGTAAGAAAATAATAAATGGACAATCAAATAT
TAAAATATACATAAATGTTAATCTTATATTTTTAGGTTGTAGAACTGTTT
CTGGGCGCTCTTGTCATTTCCCATTTCTATATAAAAATATTGAATATCAT
AACTGTACCCTTGCAGGGGATACTCAAGCT
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