EMLSAT00000006381, EMLSAT00000006381-702228 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006381
Unique NameEMLSAT00000006381-702228
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s34supercontigLSalAtl2s34:491422..493169 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006381 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006381EMLSAG00000006381-689147Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027870EMLSAE00000027870-736798Lepeophtheirus salmonisexon
EMLSAE00000027871EMLSAE00000027871-736799Lepeophtheirus salmonisexon
EMLSAE00000027872EMLSAE00000027872-736800Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778135auto778135Lepeophtheirus salmonispolypeptide
EMLSAP00000006381EMLSAP00000006381Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006381

>EMLSAP00000006381 ID=EMLSAP00000006381|Name=EMLSAP00000006381|organism=Lepeophtheirus salmonis|type=polypeptide|length=144bp
MKLNKNVTSSRRKQRKRHFSAPSHIRRRLMSSPLSKELRQKYNVKSMPVR
KDDEVQVLRGHYKGQQIGKIVQCYRKKFCVYIERIQREKANGATVYVGIH
PSKISIVKLKMDKDRKKILNRRSQGRXXATDGDKGKYTEQQMAK
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mRNA from alignment at LSalAtl2s34:491422..493169+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006381-702228 ID=EMLSAT00000006381-702228|Name=EMLSAT00000006381|organism=Lepeophtheirus salmonis|type=mRNA|length=1748bp|location=Sequence derived from alignment at LSalAtl2s34:491422..493169+ (Lepeophtheirus salmonis)
CCTTCGAGGCCTTGACTTAGATCTTCTGATCGCCTCAGGAGTCCCTTTAG
CTACCACGCTGTAAACAGTGGTGCGGCTGCAGTTTAGAACCTTGGCAATT
TCAGTGGGAGTTTTTCCCCGCGCGGAAAGTTCCAAAATTGCGACTCGACG
TCTCTCCATATTTGTTGTTTCACTGTTGCTTTTAAGATTTTGCTGGAGTT
TCGTTTATAACTAGTCCAGACCCTTGCCTCGAAGTATAAACCGGTTTTAA
TTCAATAAAATCACGAATATGTGCATGGCGTAAAATTTAAAGGAATGTTC
AGTTTTAGAAGCGCACACCTGTATATGCTAGTTATATTATGTAGCCTTTG
TTCATTAAGGCTATATCAATGAGTTTTAGAACTCATTGGCTATCTATTGT
TTTCAAGCTTTACTCACCCCATAATATTTTGTAGGATTAATGGACTATGT
TTTTTAGCATTTGGTACATCTGATAAAAAACCTTGTTTTCCGGCTAATTT
TATTGTAATACTTTCTTCCTTTTCCTTCTTCTTTCCTTTTCTTCTTGAAC
TTCGAGTAGGATACAACGTGAGTAAATAAATTTTCTTAATCAAGTTGGTC
AATTTTCATCTTGTGTTACTTTATCGTACCGAGTCGTATTCGCTAAATAC
TTCACATGTGAAAATAGACTTAGCTTTTGACTATCTGCCGTGAGAGAACG
GAAGGTTATTCCGTTCTGGTCCATGTTGATCTTGTTTTAACATGTTAACG
TCGCAGTTGTACCGGACGAGAAATGCATTGTTGCGTTCTCGCTCCCCTGC
CTCTTATGGCTGAGATACCTAAAACTGTGATGTTTTCTTATTTGCTCCTA
GGATGAAGCTTAACAAGAACGTGACATCTTCCAGAAGGAAGCAACGTAAG
AGGCATTTTAGTGCTCCATCCCACATTCGGCGACGGCTCATGTCTTCTCC
TCTCTCCAAGGAGCTTAGACAAAAGTACAATGTCAAGTGAGTTGCATTCA
TTTCATTACTGCTCTTTTCTTTATTGTGATGATAAACTATGAATTATACG
CTAAACCAACTGATAAAATCCTGATGGAGTTTATTCTTGCCCTCTCTGAT
CACCTTTTCCCTCTCCCGTCATCCAATCTGTGTATGAATCTCTACTAACC
TTCACAATATTCTCTAGGTCTATGCCCGTGCGTAAGGACGATGAAGTTCA
GGTCCTTCGTGGTCACTACAAGGGTCAACAAATCGGTAAAATCGTTCAAT
GCTACCGTAAGAAATTCTGCGTTTACATTGAGCGTATCCAACGTGAAAAA
GCTAATGGTGCCACCGTTTATGTTGGTATCCACCCCTCAAAGATCTCCAT
TGTTAAGTTAAAGATGGACAAGGATCGCAAGAAGATCTTGAATCGCCGTT
CTCAAGGKCGTKCTSCTGCCACTGACGGAGATAAGGGCAAATACACCGAA
CAGCAAATGGCCAAATAATCTTGTTCTATCCTCTATTTTTTGATAAATAT
AAGAAATTTATATCACATATGTTATATTAATTTTTGGTTCCAATGGTTTT
TTTTAATAAATGTATGAAGAGTCTATACTCGTTCTGATGAATGTGTAGTT
GAAAAGGCATGTTGTTGAAGAGTTTTATGTTGAATAACTCAGCTTCTGTC
CAGATTTCTTAATATGTAATTCGTGACGTTCCAAAGGTGTTAACTAGTGA
GAAATAAGTAGGAAGTTTAGACAAGTTTAGAATAAAGTAAATAAGCCA
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