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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s350 | supercontig | LSalAtl2s350:207605..212969 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006390 >EMLSAP00000006390 ID=EMLSAP00000006390|Name=EMLSAP00000006390|organism=Lepeophtheirus salmonis|type=polypeptide|length=1238bp
MDSTTFLEDNIKTFLGAPDVVPIPTYNPKGINAAKKCIDFXEEEDENIRV
YARIKPRLCEEEVEGSTKESRIYISGQEVVTDPSPGAGSNYSQRFLFNKI
FHPQVTQLDFFTKMVQPRLKDFLEGHNQLIFTYGATSSGKTFTVQGTLNN
PGILPRSLDTIFNSLGSERIIENTPLKPCGFDTFQSCSFQDVKEEKEFVI
SLGSYLXQAVQDDSTTSSSSCTVDMISLSKKLRGNSRKVSLKLCEERKGS
AYIKGLKEIPVSSADEAYKLLLIGRKNLHFAATKLNHNSSRSHCIFTVKI
IKFCDINQPKYARVNILSFCDLAGSERIKKTRNAGSRRIETGNINASLLV
LGRVMKTLRDNQRIKEVRKHAIVPFRDSKLTRLFQAFFVGFGKASMIVNI
SQSPYLFDETLQVLKFSAITSKISYAKEQLPAKPKRKSRFSSILFEHKRM
SSLNGRNTIMWENPEARSTLCLQNKIDEKDESDIESSEEVNETHYEALTN
LINDLEQRLVEEKRKNVSLESDIRTELCNEFNTMIMNVEKEWQTRMKETT
ERMDDLSDWRIKKLENAYNETRKRKRHHIIDDELNEKIAELEAKLEERSL
EIEEIKKQNLAVKDSHKCILDARKKLQEEVTTLKFTNEDNKRKIKSMEGE
IDKLTLQNRSKESAIESLSSNPIIKDLKNQLSDTERKLTAKTENAAYLKK
LLDEAGEEFLEKDENESKLIEAQKSLKTELAQVKIALKDAHDEYSVLIKE
SNNRQEEYESIDELLYACRKENSEIVSKNKKISAELTKYKQIDNTSDSKE
DASVVDXLRKRLDTTSSEVDGLLIKLNKTRQLYEDQGKILKKVEEEKNRL
EKDLNDEIETLRRSKIKIESSEHEKKNLLSDKEIEIQKLEKEIKNLIQKG
VANQQSLEHNSKEIEILRSDASEKQNIIENLEVQIKSSQKEDNVIKILRK
ELKLKEYELSKKEAIIREVELKLEKSLYDGEVEDLPRDEIESLKRDVIQA
NAYHSKEFDKIKKANEKVINEYKDANKELQKQVGICSNRDTADDSSQLVH
QQMNESDQSFKIDSSILPTELQASGKKKRRGKVRNTQNNSTKCNNSSSIL
VNESNVENELNDSENSVSRSQKSNKVTRSRPVHKTKKKNVNDVDRSSISE
LSSVEKERNTLKETHSFEFLHSGTENTPRRSNRTTNNNNFRQYEVLKSLE
NLTEIEEEEERASQSFVGKRQLRTRKKNPRGPTRDNKK back to topmRNA from alignment at LSalAtl2s350:207605..212969+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006390-702237 ID=EMLSAT00000006390-702237|Name=EMLSAT00000006390|organism=Lepeophtheirus salmonis|type=mRNA|length=5365bp|location=Sequence derived from alignment at LSalAtl2s350:207605..212969+ (Lepeophtheirus salmonis)
ATTGGTGAGTGCACTCCATTGGACAATTTCGTCGATTGAGGAGGTGGGAG
AAGTAGCTCAAGTGAAGATGGACTCCACAACTTTTCTTGAAGATAATATT
AAGACCTTCCTGGGTGCTCCAGATGTTGTGCCAATTCCCACTTACAATCC
CAAAGGGATTAATGCCGCAAAGAAATGCATCGACTTCGAKGAGGAGGAGG
ATGAAAACATTCGCGTGTATGCACGAATCAAGCCGCGGCTCTGTGAAGAG
GAGGTGGAAGGGAGTACCAAAGAGTCTCGCATTTATATTTCTGGGCAAGA
GGTCGTAACGGATCCTTCGCCTGGAGCAGGATCCAATTATTCTCAACGAT
TCCTCTTTAACAAGATTTTCCATCCCCAAGTCACGCAGTTGGATTTCTTC
ACCAAAATGGTTCAACCACGACTTAAAGATTTCCTTGAGGGACACAACCA
ACTTATTTTCACTTATGGAGCCACTTCTTCTGGGAAAACATTCACTGTAC
AGGGCACATTGAACAATCCTGGGATTCTGCCCCGCTCCTTGGACACTATT
TTTAATTCCCTTGGATCCGAAAGAATAATTGAAAATACCCCGTTGAAGCC
CTGTGGCTTTGATACTTTTCAATCCTGCTCCTTCCAGGACGTGAAAGAAG
AGAAGGAATTTGTGATAAGTCTGGGTAGTTATCTCCMCCAAGCAGTTCAA
GACGATAGTACCACCTCTTCCTCCTCCTGTACAGTGGATATGAGTACAAC
ACACAGGGAGAGAGAAAAAACGGAGATCGAAGGGTTAAATCACGAGGGGA
TGTTCTATTCTCTGTGGATCTCCTTTGCAGAAATATACAATGAAAACATT
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTCTTTGAAAAAGTCTCT
TTGTCTAAAAAGTTGCGAGGGAATTCTCGCAAAGTGTCTTTAAAATTGTG
TGAGGAACGAAAAGGAAGTGCCTATATTAAGGGTCTCAAAGAAATACCCG
TCTCTTCTGCAGATGAGGCTTACAAACTCCTACTTATTGGTAGAAAAAAT
CTTCACTTTGCTGCCACTAAACTAAATCACAATTCTTCCAGGAGTCACTG
CATTTTTACAGTGAAGATAATTAAATTTTGTGATATAAATCAACCCAAAT
ATGCACGAGTAAATATTCTCTCTTTCTGTGATTTGGCTGGGTCGGAGCGA
ATAAAGAAAACAAGGAATGCAGGGTCAAGGCGAATAGAGACTGGGAACAT
TAATGCATCCCTTCTTGTTCTGGGTAGAGTGATGAAAACGTTGAGAGACA
ATCAACGGATAAAAGAAGTGAGGAAACATGCAATTGTTCCTTTCAGAGAT
TCAAAACTCACTCGCTTATTTCAAGCATTCTTTGTTGGATTTGGAAAGGC
TTCCATGATTGTTAATATTAGTCAGTCTCCCTATCTTTTTGATGAAACAC
TCCAGGTCTTAAAATTCTCTGCTATTACGAGTAAAATTAGTTATGCTAAG
GAACAATTACCTGCTAAGCCCAAGAGAAAATCTAGATTCTCATCTATTTT
ATTTGAGCATAAGCGAATGTCTTCATTAAATGGACGAAATACTATCATGT
GGGAAAATCCTGAGGCAAGGTCAACACTATGTCTACAAAATAAAATAGAT
GAAAAGGACGAGAGTGACATTGAGTCCTCTGAGGAAGTTAATGAGACACA
TTATGAAGCCCTAACAAACCTCATCAATGATTTGGAACAACGGTTAGTCG
AGGAAAAACGTAAAAATGTATCCTTAGAAAGTGACATTAGAACTGAATTG
TGTAACGAGTTTAATACCATGATAATGAATGTTGAAAAAGAGTGGCAAAC
ACGCATGAAGGAAACAACGGAGCGCATGGATGATCTTAGTGATTGGAGGA
TTAAGAAACTAGAAAATGCCTACAACGAAACTCGCAAACGTAAACGACAC
CATATTATTGACGACGAATTGAATGAAAAAATAGCTGAACTTGAAGCTAA
GTTGGAGGAGAGAAGTCTTGAAATAGAGGAAATCAAAAAACAAAACTTGG
CTGTTAAAGACTCTCACAAGTGTATCCTTGATGCTCGAAAAAAACTGCAG
GAAGAAGTTACAACTTTAAAATTTACAAATGAGGACAATAAAAGAAAAAT
CAAATCCATGGAAGGAGAAATAGACAAACTAACATTACAGAATAGAAGCA
AAGAATCTGCTATAGAATCTTTAAGCTCCAATCCCATTATAAAAGATTTG
AAAAACCAACTTTCGGACACCGAAAGAAAGTTAACTGCAAAGACGGAGAA
TGCTGCATATCTCAAAAAACTTTTGGATGAAGCTGGTGAAGAATTTCTTG
AAAAGGACGAGAATGAATCCAAGTTGATAGAAGCTCAAAAGTCTTTGAAG
GTATTGTACATATTGTATTAAATGATAATAATTAATTAGCTCATTGTACT
CAAATTTATTCCAGACTGAATTAGCTCAAGTTAAAATTGCACTAAAAGAT
GCACACGATGAATATTCAGTCTTAATAAAGGAATCAAATAACAGACAAGA
AGAGTATGAATCAATCGATGAACTTCTGTATGCTTGTCGAAAGGAAAATA
GCGAGATAGTTAGTAAAAACAAAAAGATATCTGCAGAATTAACAAAATAT
AAACAGATCGACAATACTAGTGACAGTAAAGAGGTAAATTTGTTCATAAC
AAATTATTAATGTCTTTTAAATATTCTGAATAAAAATAATAATTTTATGT
TTCATTTTAAGGATGCTTCAGTAGTCGATAKCCTCCGTAAAAGGTTGGAT
ACTACCTCTTCGGAAGTAGATGGTCTTTTAATCAAATTAAATAAAACAAG
ACAACTATATGAAGATCAAGGAAAAATTCTCAAAAAAGTTGAAGAGGAAA
AGAATAGGCTTGAAAAGGATTTAAATGATGAAATTGAAACGCTGAGACGT
TCGAAAATTAAGATTGAATCTTCAGAGCATGAAAAAAAGAATCTATTGTC
TGATAAAGAGATTGAAATTCAGAAGCTAGAAAAAGAAATTAAAAACTTGA
TACAGAAAGGTGTAGCAAATCAACAATCTCTTGAACATAATTCTAAAGAA
ATAGAAATCTTGCGATCTGATGCTTCTGAGAAGCAAAATATTATTGAAAA
TCTTGAGGTTCAAGTAAGATCAAGAAAATATATATATATATTTTTTAAAT
TTTGTTTTTAAAGATAAAGTCCTCGCAAAAAGAAGATAATGTGATAAAAA
TCTTAAGAAAAGAATTAAAGCTTAAAGAATATGAGCTTTCCAAGAAGGAA
GCTATCATTCGAGAAGTTGAGCTAAAGTTAGAAAAATCATTGTGAGTCTA
GTTAAACATACCTTTAAAAACTACCATTATTTTTTTTATATGTTTGCAGA
TATGATGGAGAGGTTGAAGACTTGCCTAGAGACGAAATAGAATCATTAAA
GCGGGATGTAATCCAAGCAAATGCGTATCATTCAAAGGAATTCGATAAGA
TCAAAAAAGCTAATGAAAAAGTAATAAATGAATACAAGGATGCGAATAAG
GAGCTCCAAAAACAAGTCGGCATTTGCTCAAATAGGGATACTGCAGATGA
TTCTAGTCAATTAGTCCATCAACAAATGAACGAATCAGATCAGAGCTTTA
AAATCGACTCAAGCATTCTACCAACTGAATTGCAAGCCTCTGGTAAAAAG
AAAAGAAGGGGTAAAGTTAGAAATACCCAAAATAATAGTACAAAATGCAA
CAACAGCTCCTCAATTCTGGTTAATGAAAGCAATGTTGAAAATGAATTAA
ACGATAGTGAGAATAGTGTAAGTAGGTCACAGAAATCAAATAAAGTCACT
CGTTCACGTCCAGTTCATAAAACTAAGAAGAAAAACGTTAATGATGTTGA
TAGAAGTTCCATATCGGAACTAAGTTCCGTAGAAAAAGAAAGAAATACGC
TTAAGGAAACACACAGTTTTGAATTTCTTCATTCAGGCACTGAAAACACT
CCAAGAAGATCAAACCGAACGACTAATAATAATAATTTTAGACAATATGA
GGTAAGGGTGAAAATCAACACTTGTCTGACAAGCTAATCTTGTAAAAAAA
TCAGTTTTTGGAATGCCCATAGTGATTTTTATTGCCATTTAAGCAACTTT
TTAAGAGTCTAATAACGATTCATACCCAAAATCAAAGTTAACAATAATTG
ATTGAGAAATTAAATATAATTAAGTCAATTATACGAATAATTGTAATAGT
TATTAATACATTGTTAAGAGGGAAGGGGATTAACAATATTTAAAAATATA
TGGTTAATATTCAACATAACTGATTTACTCGTTTATCCTTATAATSTATG
TAACTATATTTAATTTTGGAACTTTTATAATGAACCCCTGCACTTATTAT
ACATTAAATATTCCATAAAAAGTTATAAACTAAATTGAATATTGAAGATT
CACTGTTTTTGTGAAGAAAAAAAAATGTTGAATTTGTATTATGTTTATTC
CTTAATTTTAGAAATTATATATAGCATTTGAAGGGGGAAATAAATATTAA
TAGCTTTCAAATAAGATCCTTCATTTTACCTTTTATCTCACTTTCAAGAC
CAGTTTACGGAGCCTATTATATTCCAGTTCACTTTTTTAACTATCATTCC
ATAGTTATTTGACCAAAAATTCATTTGCACTAATGTACTCAAGATTTTCG
TTTTGATTGAGGGTGAGGWTTGRCCAGCCAATGCGCTGTTTTATCTGTGG
GGCAATTATTCTATGACATAATGGCGCTGCAAGTACCGGTTTCAATACCT
GTTTAGTACCTTTTCAAATGCACCATTAGCTCGATGCCATTGTAATTCCG
ATATACCGAACACAGCACTAATATCTTATTTCTCTTTTTTAGGTCCTCAA
GTCTCTTGAAAACTTGACTGAAATTGAAGAAGAGGAAGAGCGTGCCTCTC
AATCATTTGTTGGAAAAAGACAACTTAGAACTAGGAAAAAAAAGTAATTT
TTATAGTGTGGTGATGATAGGATTATATTAATATTGTCTCTTTTAATAAA
AAATATCATAAAAACATTTATGAATATTTTATCTCAACATTTTACTAAGC
AAGTCCCCGTGGTCCTACTCGAGACAACAAGAAATGATGATGATTTTTGG
GAGGCCAAAACAAACTTGTGTCTATATGTTTCTGATTATTATTTATTTAT
CCCATTTGATTATTATTTTTACTATTTTATATCAAGTGCTCAATTTGATA
TCTCTTATGTCAAGCATAAATATATTATTCAATAATTATGTTTTTAATAT
CAGATTTCATTGTTT back to top
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