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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s350 | supercontig | LSalAtl2s350:499081..506493 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006397 >EMLSAP00000006397 ID=EMLSAP00000006397|Name=EMLSAP00000006397|organism=Lepeophtheirus salmonis|type=polypeptide|length=636bp
MSGDEKPLSSKRSAEEEDKKEGAEDDEDDWIGPLPSEASVKKRPKILEYE
ETYLKNLPCAESYEKSFMHRDSVLFTCVTASDFVITASVDGHVKFWKKHI
YSIEFVKHFRAHLGSIADISVNNPSGTLLATISLQDEQCKVFDVVNFDMI
NMIRLNFKPSLVQWIHKTGDPLHLLAITERQSNVIRIFDGNTPSPPLKTF
DRIHFKTISAIAYSSPLDMIISGDSGGIIEYWTKEEGKLPSNDIIDFDSK
LDTDLYEFAKRKTYPLNICIASDGKSFASFGADRIVRVFKLSAGKLFLTI
DESLRHYINLQTTKKFLPPMEFNKKLSVEKDMEKSTDENLLRLNSIIFDK
SGHFILYSSMLGIKVVNIVTGKCVKVLGRSENVRFLNISLFQGIAKKTTE
AAQTMETIASDNPALDAGLPDPTLFVSANKKNRFYLFTRRAASSASNDGE
RDIFNEKPSKEDIIAASEDKGVPKLYXSXXIHTSVGDIHIQLFAQECPKS
VENFATHSKNGYYNGHIFHRVIKQFMIQTGDPTGIGTGGESIWGGEFEDE
FNSKLKHDRPYTVSMAXAGPNTNGSQFFMTVVPTPWLDNKHTVFGRVVRG
MEVAQNISNVKTHPKTDKPYNEITIISITVRDPLHF back to topmRNA from alignment at LSalAtl2s350:499081..506493+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006397-702244 ID=EMLSAT00000006397-702244|Name=EMLSAT00000006397|organism=Lepeophtheirus salmonis|type=mRNA|length=7413bp|location=Sequence derived from alignment at LSalAtl2s350:499081..506493+ (Lepeophtheirus salmonis)
TTTATTTACATATTTCCATGATTATGTACCTCAAGAGTCAAGACAGAAAA
AGTCATTTTGTTATAATTTTAAGAGAAAAATTCAGAAATCATGACAATGC
GATATAGTAGGTATATGAGATGAGTGATACGTTAATTTCAAATGATACAA
GGCAAAATAATACACATTATTAGTTAGATACAAAGAACATAATTACATCA
AATAGTTGAGCATTCACAGTGAGTGTAAAAAGCTAAACGATAAAATGTTA
TAGACAACGCATTAAGTGGTCTACGTGAAGTATTAAAATTTCATATCAAT
TTTTTGTTTTAAAGTAACATAATATCAGAATGAATGCGTGCATTATTGTG
TTTCATTAAAAAAAAACTATCCGTCCGTATCCATTTCGTCAGACTCTTCA
TCCGAATCGTCATCTTCTTCTTCAGACTCAGATTCCACCCATTCCATTGA
ACTGTAATCCGACTCAATAATGGTTTCCCATTCTTCCAATTTCCTTAAAT
CTATGAAGAGAATAAAAAGGTACAGATTACATTAAAATATATCATGAAAT
TGGGATTTATATATAGAAGCAGAGGTGGGAATACTTATACTGCAAGTCCA
TTTTGTGTCTCAAGTATTTGCTCATAAGTCCTCCAATCTTTTCATCGAGT
CTATTTCAAGTACTCAGAAAATAAGTAAGAAATACTCTAAAGAGTACCTA
ATATCTAGGGGAAAAAAGTTAAAAGGATCCAACTGGAGTCGCGAGTCTTA
GATTTTGAATGACAGTCAAGTCTCGAGTCCCCCCCCCCCCCCCCGGCTCT
GCATTAAAGTATAATTATAACTACCTAGTGTATAAAAATCTCTTAATGTG
ATTTGACGACTTTTACTGTCCTCTACCACGCCACCATATAGATAGAGAAG
TCCCTGTTTGACCACCAATCCAGAGCCATATCGAGGGGACGGTGTAAAAA
CGTTGGATTTCTTAGTTATATTTTCAGAAAGAGAGTTATCAGGGCTATCA
TTTGCCTGAGAGGATGATGATCCGACTGTACTCGTAATTGTAAATGCACC
AGATTCAACAGTCACAGTGGCGGGCTCTTTTTCTTTCTCTTCTGTCTGTG
CATGAATGAATGAATAAATAAATATTGAATAGGAAGATAAATTTTAATAT
ATTACCATTTCAACATCCTTTTTTGTATCGCACTGCCCTGCTTCTTTTTC
ATTGTCATCTTTGGACTTTATTTTTACTTTATCCCGTTTTCCGATGACTT
CCACTACAATATCCAAAGACAAGATGAATATAAATATATATGTATTAAAA
CCATCCATAAACATTACAAACCTGAATGCCAAACAGCTCTTTCATTCTCA
ACAGACACAGAAAACAACTCGTTAAAGAACMTAGCCGATGCTCCTTCATC
CTCTTCATCTTCCGATTCATTTTCCTCTTCCAAATCTTTATCAAGAACAC
CACCAAAGAAATAGTTTTTCACACCAGATAAACCCATTGCACAGGACATC
CCTGTTCTCGGAGTAGGTCTGTACCCGATTTGTTTCACACTATGCCAACG
CCACTTAGTAAAGCTTTCATCATGCTTATCAGGAACGATCATGTGCATAT
CAGTAAAAGTCCTTCCAACCTCATCGTCCCCATCCTTTTTCTTTCCTTTC
TTTTTCTCCTTGCAAAAACCTCCAAACAGAACGACTCCTTTCCCATCACT
TGACAAAAATAAGTTACAAGCTGATCGGGGATCAGGAACCTTCGTACCAC
CCACATCTATTTTACTCCATTTATAAGTGGATAGATCAAAAATGTAGACG
TCATTGAAATATTTGCATTCCCGAAGATTGTCATGAAATCCCCCAAAGAC
TACAAGATAGCGTTTYAATAAAATCAMACGATGACCACTACGAGCCGATG
GACCTCCAGCTGCACTAAAATACACGAAAAGTCGCGGAGTTAAATGAAAT
ACTAAAAGAGAATGTAAAGGATTCGCAAATGTACCTGATTTTTTCCCAGC
GTTTGGAAGAGAAGTGGAAGCACCAAAGATCCTTGTAGTGATAGAACTGT
GTTTCACTGGGATTCGTAAATTCACCTCCAAATACCCAGAGTTGTCCCCC
AGCAGTGGGATTAAGTACGGCTTGATGTGCACAGCGAGGTGGAGGTCCAC
CAGGGGATTTAATTTGAGTCCATTCCCTTCGTTTTGTATTGTAAATGAGG
AGATCATTGTTCAGAATGTTCTATTCATAATAATTAGGAATATAAAGGGG
CTTGTATTATAATGTGATCATTATGATTAAGATATCTGTCCTTGTCTGGC
AAAACAATGTATCTGACTTTAATCAAATTTTTACAGGGGAGCCCAAAACG
TAGGTATAAGAATTATGATTTATCCTTTACTTCTAATAGGTCAAATTGTA
TTTATTCTTATATCAGAAGAGTACAAAGACGGCTCAGGTCGAGGGCCAAA
TTGTCGTAACTCAAAAATTACAACTATTTCCATGTCATCCTAGAAGTCTT
AGTATTTAATGTGAATACTTCAAAACGAAGAAATTCAGACTCTTAAATGA
TTTTCACAGAACCATTTTATTGTAAAAAATGGAAAAATGCATTATTCATA
ATGAAAAATGGGAGTTTCCGAGATTTTAGTTACGACAATTTGGGTCTCAK
CCCGCCTAATCTTCTATGAAGTAGTGTCTACAATTTTAGTTTTTATATGA
AGTGGGAGATTAATTCCGACTAATGGGGAGAATACTATTAACAAAATCAA
ATCTCTATTGATTTTTTTTAATCAAAATGATAGAACTCCCCAAGAATATT
TAATTTATGCCAGAAAGTGAGAATTAAAATTTTCCAGAGGAATTATATTG
CCAGACATGGGCAGAGGAGTGTAGACCTACAGTTTTCCCGTTGTAGAATT
CTCCCCCAAAAAGGATAATTTCAGGGTTTTCAGGATGAGCGGAAATAGAG
AAATTACATCGATGAGAAGGAGGTTCCACTTTCGCCTCTTTTACCTCGGA
TCTCTTCTTCTCCTCTGCCTCAATCGATTTAACTACATCTTCAATATTTT
CCTAGTAACAAACACAAAATAAAGGTTGAAGATCGGTTTATGAATAAAAT
TCTGTTCATGACTGATTTACCTCTCCGTGAACAGCGAGCTGCTTCTTCAA
TTTAGAAGTTAGCTTCTTCTCTGTTTTAAGAGCTGTTTTCTCGGCTCCTT
TCCCTTTCTTCTTCTTATCCTTTCCCATGTTGACGAACGATACGACTCCG
TAAACAAATCGAGTTCAAATAAAACACGTGTTGAAGTTGGTGTTGAAATG
TGAGATGTCAGATTGATTTTTAAACGAGTTGCGCCGGTCTACAATATACA
ACGAAATCCTAAATGGGCTATTTAATAGCCAAAAAAATATACAAAGGACA
AATATACAAAATATATAAAGGAGCAATGCTGGCAAAAAAAAAAACAATCA
CGCAACCTGTTGTAGTGAAAAATATAATCTTTTATGATAAATTCCACTTG
GTAAACTAATATGAGCTTAGAACATTTACGCAATAAACTCTTTAACATGT
AATTACTTTAATTTTTAGAAATAAATATATAGTGAGTTCATTATTTTTGC
CTCAATAACAATTTTGGGGATTTTAAATATTACTCATAAATGACAGAATT
GCTTAAAATGTCACGTGATGTCGATATAAAATGACAACTACGACAAATAT
TATAGCCTTATAATATAAAAACTTCATATGAGTTTACCAACGGGGATTTC
TCATTACTCATTAGTCATTAATAGGATGTTTTCACCACCATAGGTTTGGT
GATTAGTAGAACTCATGGGACATAAACGTACACATTGTTTACTCCTGTCT
ACGAATAATAAATAATAAAGCTCATATATATTGTCGTCCTCATGTCGGGA
GACGAAAAGCCTCTTTCCTCCAAAAGGAGCGCTGAAGAAGAGGACAAAAA
GGAGGGTGCAGAAGATGATGAGGATGACTGGATTGGTCCTCTACCGAGTG
AGGCGTCAGTGAAGAAGCGTCCCAAAATCTTGGAATATGAGGAAACCTAC
TTGAAGAATTTACCTTGTGCAGAATCTTACGAAAAGTCCTTCATGCATCG
AGATTCTGTCCTTTTCACATGCGTTACAGCCAGTGATTTTGTGATTACGG
TAAGGTATTAGTAGACTAAAGGCACTCCTATCTCATACATTTCTCTCTGA
ACAATTTACTAGGCAAGTGTGGACGGTCATGTTAAATTCTGGAAGAAACA
CATTTATTCCATCGAATTCGTGAAGCATTTCCGGGCACATCTCGGGAGTA
TTGCAGATATATCCGTCAACAATCCTTCGGGTACTCTCTTAGCCACAATC
TCACTTCAGGATGAACAATGTAAAGTCTTTGATGTCGTTAATTTTGATAT
GATTAACATGATTCGTTTGAACTTTAAGCCCTCCCTTGTTCAATGGATTC
ATAAGACTGGAGATCCACTTCATCTTTTGGCCATTACGGAAAGGCAGTCT
AATGTCATTCGGATATTTGATGGAAACACTCCAAGTCCCCCGCTCAAAAC
ATTTGATCGCATTCATTTTAAGACCATATCTGCCATTGCCTACTCATCGC
CTTTGGACATGATCATTTCGGGGGATAGTGGGGGTATTATTGAGTATTGG
ACCAAAGAAGAGGGGAAATTACCGTCTAATGATATCATCGACTTTGATTC
CAAACTAGATACGGATTTATATGAATTTGCTAAACGAAAAACATATCCAC
TTAATATTTGTATAGCCAGTGATGGAAAATCCTTTGCATCCTTTGGTGCA
GATAGAATAGTTCGTGTATTTAAACTCTCTGCCGGGAAATTATTCTTGAC
CATTGATGAAAGTCTTCGACATTACATTAATTTACAAACAACTAAAAAGT
TTCTACCTCCTATGGAATTCAACAAAAAACTCTCAGTAGAAAAGGATATG
GAGAAGAGTACTGACGAGAATTTATTAAGACTCAACTCCATTATTTTTGA
TAAGAGTGGACATTTTATTCTATATTCGTCCATGCTTGGTATCAAGGTCG
TTAACATTGTGACGGGGAAATGTGTCAAAGTATTAGGAAGATCTGAGAAT
GTGAGGTTTTTGAATATATCTCTATTTCAAGGAATCGCCAAAAAGACAAC
AGAGGCTGCCCAAACTATGGAGACCATTGCTTCAGACAATCCTGCATTGG
ATGCTGGCCTACCTGATCCCACTCTATTTGTCTCTGCAAATAAAAAAAAT
CGGTTTTACTTATTCACAAGGCGGGCAGCCAGCTCTGCCTCCAATGACGG
AGAGCGGGACATATTCAATGAAAAACCTTCTAAAGAGGATATCATAGCAG
CCTCAGAGGATAAGGGTGTTCCTAAGCTCTATKCTTCTSCCKCCATCCAT
ACCTCAGTTGGGGATATTCATATTCAGTTATTCGCTCAAGAGTGTCCAAA
ATCTGTGGAAAACTTTGCCACGCACTCAAAAAATGGGTACTACAATGGCC
ACATATTTCATCGTGTGATCAAACAATTCATGATTCAAACTGGTGATCCC
ACTGGAATAGGAACTGGAGGAGAAAGCATTTGGGGTGGAGAGTTTGAGGA
TGAGTTTAATTCAAAACTCAAACATGACAGACCCTACACTGTAAGTATGG
CTAAWGCGGGGCCTAATACAAATGGTAGCCAATTCTTCATGACAGTTGTT
CCAACTCCTTGGTTAGACAATAAGCACACCGTATTTGGAAGAGTAGTGCG
TGGAATGGAAGTAGCTCAGAATATTTCTAATGTGAAAACTCATCCAAAGA
CAGACAAACCTTACAATGAAATTACTATCATAAGTATTACAGTGAGGGAC
CCTCTTCATTTCTAAAACTCTTTCACTTAAACTGTTTGGTTTTTTTCTTT
TTACATAATATATTATTTAAAAAATAAATACAATGTTTTTGCCACTTAAT
GACTTTTTTTATCACAGTTGTATAGTTAAGAAAACAGAACAAAGAACGAC
AATACTGTGCAAATTAGTCCCTAGAACAAATTTTCATAATCCAGCCCTAG
TTTATTATACCTAGTAAATTCCCATTGCTGATTTGGATCTGATGGATTAC
ACTTATCAACTGTTGCTACGCCGCTTCCAGCGGTCAAGCAGCGCCCAGAA
GAATGCCGCAATATCTTTTTATTCGGATCATAATTCCAAGTCCCTGACAT
TTGACAATGGGCAACAATAACAGTAGAACCCTGAATTCCTAAGCAAGTAT
AGTCTCTTAGTATAAAGCGATTGCGGTTCATCATCCAATACTGATTACCA
CCTAAGTTGTGACAGGGAATAAGATCAACGGGATGCCCCATGTACTCCAT
TCTATCATTTTTGTCCATACAAACACCGGTGGAAGGATTCTTAATTTCTC
CGGAGCCTATCAAAGAGTGGTAGGGGAGCTCAGACTTGCCAATGTTATCT
AAGAACCATTTAAAGGAATTACAACCCAGTTTGTCTCTTAATTCCTGTCT
TTTCGAAACATCTCCATAGCTTATGAGTCGTTCCTCTCCTTTCTTATTAA
AAGCACCAAGTCTTGAGAGGAGAATAATTATAAATTAGTAAAATATATAT
AATATATGTGAGGTACAATTGGGTGTTGTATCACCTTTCGTAAAACAAAT
ATTGGAATTCATCCATCCACACTTTGGCTACTCTTATTCCATTTTTGTTA
ATGTCGTCAGGAGTCACACGATAAGGAGAATGTGTTCGGAAGACATGACC
AACTCGTGAGCAAGGGGAAATCTCTATGGTTCCCCCACACATCCATGCCT
TAAAACTGAGTTCATAGTTTTCGCCACCCCAAACTGACATACCTAGGAAA
AAATGAATAAAGGGTTTATATATTATATAGATGATACCCTAAAACTTTCT
TATTCTCGAATTTCTGTTACCTTCATCATAAAATCCAAGAGTTTCAAACC
AGTCCTTGCGTATACTGAATAATCCTCCAGCCATTATAGGATTTTTATGA
GGAGCCCAAATATTTTCTTTCTTTGCTATCTCCTGTTCTGACAATTCTCT
CCACTCAAAATCTAGTTTCCAATTCATTAATCCATAGAGATCCTTGTAAA
TAAATGTGTAATAAAAGGTAGTGTCATTGATGYAATCAATGACAGGACTC
GTAATGAGCTGGGGATTGTTTTTAATACTGTGAAGGAGAGGTTCTAGCCA
ACCCTTTGAGGCTTCAATATGTGAATCTAAAAAGGTTAAAATTGGAGCTT
TGGATTCTTTGATACCAACCATTCTACACCTCATTAACCCATGTCTCTTT
TTAAGATGAATAACTCGTGCAATCCCATTGAAATTTTTATCCACATAGTC
GTCCAATTTATCACCTAAATGCTCCAATGAGGAATTATCATCCAACAGCA
AAATTTCTTTAAT back to top
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