EMLSAT00000006412, EMLSAT00000006412-702259 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006412
Unique NameEMLSAT00000006412-702259
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s350supercontigLSalAtl2s350:789470..790848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006412 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006412EMLSAG00000006412-689178Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028000EMLSAE00000028000-736928Lepeophtheirus salmonisexon
EMLSAE00000028001EMLSAE00000028001-736929Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779723auto779723Lepeophtheirus salmonispolypeptide
EMLSAP00000006412EMLSAP00000006412Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006412

>EMLSAP00000006412 ID=EMLSAP00000006412|Name=EMLSAP00000006412|organism=Lepeophtheirus salmonis|type=polypeptide|length=159bp
MTVYPSIVHYGFVVRIKWNLIEPWSLLSAKASERVFKTMINHDGSLPERI
YKPLYLKAHGGNKLPFNAIIFGPSPSGDDKTPLIVIPHGGPHCATTSSSY
SLELNFFIELGFSVLLVNNIGSLGYVDESVHGLLGGAWVRMILMTAYKLF
QNVLKLILT
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mRNA from alignment at LSalAtl2s350:789470..790848+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006412-702259 ID=EMLSAT00000006412-702259|Name=EMLSAT00000006412|organism=Lepeophtheirus salmonis|type=mRNA|length=1379bp|location=Sequence derived from alignment at LSalAtl2s350:789470..790848+ (Lepeophtheirus salmonis)
CATGGACTCGTTTATTTTGAGTAATGATTCCTGGATTGATTCAGAGTCTT
CCTCTTCAGATGTGGATTCCCTTATATATAGGGAGTTGGACTCCCTAACA
AACCTGTATATAGATTATTTCTTCGTTTTTGTAGTAATCGTCCGTCCATT
ATCTTTCAAATCAATAGGGATGGTACTGACTTTAAAATTCTGCATGGGCC
CTCTGCTCAAAGTAATAGCAGTTAAGTTCAAACGACAGCCAAAGGGGATG
TGTTTTGGTTCAGAAGGGATTTATATGAGAAACTATGTGCAGGGCCTCAT
CTAACTGAGGTGAATTTAATGGGAATCGTTGGAGGACGTGATCCTGAAAT
CATAGTGAAGAGCTCTCATGCAAAGTTTTTTGATCAACTCGCACCTAAGC
GCATCAGTTTGAATGATGATACTCTTTTACATTAAACACTATTGTTGATG
GAATGACAGTTTACCCATCAATTGTTCACGTAAAAGAGAAGTGTATTGAA
TTAATGTAGAATGCTCAAAATATTAATATACTAGATTCATAGTATGGATT
CGTTGTCAGAATTAAATGGAATCTAATTGAGCCTTGGTCTTTGCTATCAG
CTAAAGCTAGTGAGCGGGTCTTTAAAACCATGATAAATCATGATGGATCT
CTACCAGAAAGAATTTACAAACCTTTATATTTGAAAGCTCATGGAGGAAA
TAAATTACCATTTAACGCAATCATATTTGGACCATCACCCTCTGGAGACG
ACAAGACTCCACTTATTGTTATTCCTCATGGAGGTCCTCATTGCGCTACT
ACAAGTTCTTCCTATTCTCTAGAGCTAAATTTTTTTATTGAACTGGGATT
CTCTGTACTTTTGGTTAACAACATAGGATCTCTCGGTTATGTGGATGAGT
CTGTACATGGATTGTTGGGGGGGGCGTGGGTAAGGATGATATTGATGACT
GCATACAAGCTCTTCCAGAATGTCTTAAAATTAATCCTCACTTAAACGAT
AAAGACATTTTTCTTTGGGGTGCTTCTCATGGTGGGTTTTTAGTTACTCA
TCTTGCCGATCAGTACCCAGAGCTTTTCACTGCAATTGTGGTTTTGAATC
CAGTTACCAATATAGCAAGTATGGCCTCTGCAACTGATATTCCAGATTGG
TGTTTTAATTAGAGGGGATTCCCCTTTCACTACAATACTCCCTTGACCCC
TGATATAGCCAAAATAATTTGAGAGAAATCCCCCATAAGTCATATCAAAA
ATGTTAAGGGCCATATTCATTTGTTGATTGGAAAGGAGGACTTGAGAGTC
CTTCCATCTATAGGATTTGAATATTACTAAGCACTTAAAGGACTAAATAA
AGAAGTTACAATTTCCCGGATAATCCTAG
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