EMLSAT00000006437, EMLSAT00000006437-702284 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006437
Unique NameEMLSAT00000006437-702284
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s351supercontigLSalAtl2s351:641710..645956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006437 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006437EMLSAG00000006437-689203Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028103EMLSAE00000028103-737031Lepeophtheirus salmonisexon
EMLSAE00000028104EMLSAE00000028104-737032Lepeophtheirus salmonisexon
EMLSAE00000028105EMLSAE00000028105-737033Lepeophtheirus salmonisexon
EMLSAE00000028106EMLSAE00000028106-737034Lepeophtheirus salmonisexon
EMLSAE00000028107EMLSAE00000028107-737035Lepeophtheirus salmonisexon
EMLSAE00000028108EMLSAE00000028108-737036Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779072auto779072Lepeophtheirus salmonispolypeptide
EMLSAP00000006437EMLSAP00000006437Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006437

>EMLSAP00000006437 ID=EMLSAP00000006437|Name=EMLSAP00000006437|organism=Lepeophtheirus salmonis|type=polypeptide|length=319bp
MGISLLVRSFTRYLRCTPYLHENMSLKGKIAIVTGASRGIGKGIAHQIGG
AGATIYITGRSKNELEKTASEIKERGGSPIPVQLDHNNDLDVEQFFERVK
NEQKGQLDLLVNNAYSGVGIINECMAKPFYECPTPDMWDKINGVGLRNHY
LCTVYGSRIMVENRTGLIVNISSAGGLTYLFNVPYGIGKAACDRMAXDCA
VELKKKKCDNGFCLARSENPKAKKSGKRMFENGESTEFTGMAIVKLASDP
NKIQLTGKILFTSFLARKYEITDLNGTITGDMFSIKNILYIRGNNWLSSL
IPSFITVPKIFIHYLSNKF
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mRNA from alignment at LSalAtl2s351:641710..645956+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006437-702284 ID=EMLSAT00000006437-702284|Name=EMLSAT00000006437|organism=Lepeophtheirus salmonis|type=mRNA|length=4247bp|location=Sequence derived from alignment at LSalAtl2s351:641710..645956+ (Lepeophtheirus salmonis)
TTTCAAGTCTATAATTATAATATAAAGTCTACACTGTAAAAGCTTTTCTT GAGTTCATTATAAATTAGCTTTACAGTCAAAGTCGAATCGTAAATAGTTG TTGGAGTGAAAAGGTAGGCTGTAATTGCTCGGGGGGTTACAAGACGAGGG ATAGTTGTCCTGTTTCTATTGTGGCTCTATGATTAGTGTCGGATTGGTCT AAAAAGAATGCAGTCTTATTCCTTCGGTCCTAATAAAATTTGTCTGTCCT AGGAACAGTCCTTATTATCGGTCTTTTATGGTAACTACAACAGCTAAAAT TACGTTATTATTAACTATGCCCTTTCAGCTGTTCAACATAACCTCCCTGT AAAAGAAAAACTATAAATTTCAGGTATTTTGGAACTAGCAAATACTTGCA AGATACCTGAAGTTTAAAGTAGGAGGTGTGTAGCTCTAAGTTATGATTAT ACTGTTCTAGCTATCATTTATTATTTTTTTCGTTTTTATTTTATTCAATC CTAACTATGAGTTATGACTGAAGAATAGCAATAAAGATTGCTAGGACCGT TAAAAAAAGAAGAAGACAAATGGTAATCAGTCGTTGGACCGATTCAACAC TACTTAGTTAATAACTTATTATTCATTATATAGCCGATAGAAGACTACAG TTTTGTGAACCTGCTCTGGTCTTCCCTATGTGACTATTACTCAACAGTCA ACTCTGAAATTTATTCCCAGTATACAGTTTATACTATCCCTCATTTTTAT AATTATAAGTTAAAAAATCATGGGTATTTAACTATTTTAACAATTATACG TGAATTAATTATTTTCTTCCCAAATATGTACGTATAAAAGGTATTTCTCT GTTGGTTCGATCCTTTACTAGGTACCTGAGATGTACTCCATATCTTCATG AGGTAAAACAAAAACAAAATAATATATTAAAAAGTCATTGATACGTCATT AACAATATTAAAATATAGTTCATAGTTATATAACAAATTCAATGCCAAGT TCATTACTTATCATATTATTTACTTTACAAGCATCTTAACTAAAATTTTG CCACTATATTTGATAGGAATACATTCTTAATTAATAATTTATGTAAATAA ACGTTCATAGTTATACAAAATTATGTGGTTTGTTAATTCTCTACTAAAGA GTACAAACTGTATTTTACGAACAAGATATACCTTTGCTTTAAGAACGAAA TTAGTTAATAGCTACAATATGAACTCATTTGCATTATAATACTATAATTG ATAACATTATTAGAATATGAGCTTGAAGGGAAAGATTGCTATTGTAACAG GGGCGTCTCGAGGCATTGGGAAAGGAATAGCACATCAAATTGGAGGAGCC GGAGCAACCATTTATATCACTGGTAGATCAAAAAATGAATTGGAAAAAAC AGCCAGTGAAATTAAAGAGAGGGGAGGATCTCCAATCCCTGTTCAGTTAG ATCACAACAATGACCTGGATGTGGAACAGTTCTTCGAAAGAGTTAAAAAT GAACAAAAGGGTCAGTTGGACTTGTTAGTAAACAACGCCTATTCTGGAGT TGGGATCATAAATGAATGCATGGCAAAACCTTTTTATGAATGTCCAACTC CTGATATGTGGGATAAAATCAATGGTGTTGGTTTGAGGAATCATTATCTT TGTACTGTATATGGGTCAAGGTAGGCTTTTTCTTTTAATCAACTCATTCT CAAAAGATAGGACGAACTGATTTATGACTGAGTGTATTTAAAGAATCATG GTAGAAAATAGAACTGGTCTGATTGTGAACATCAGCTCTGCTGGTGGACT CACGTATTTATTTAACGTACCTTACGGAATTGGTAAGGCAGCATGTGATC GAATGGCTGSTGATTGTGCTGTTGAACTTAAAAAAAAGAAATGTGACAAT GGTTTCTGTTTGGCCAGGTCCGGTGAAAACTGAGGAGATAACAAATAGGG TTCTGGGTTCGTAAACACGCATGCTGTATCAAAGATACATTTAATTTTCT AACATTTATATGTTTCATATTCTAGAAAATCCCAAAGCAAAAAAATCTGG AAAAAGAATGTTTGAAAACGGAGAATCAACAGAGTTCACGGGGATGGCAA TCGTCAAATTAGCATCAGATCCTAATAAAATTCAATTAACAGGGAAAATT CTATTTACAAGTTTTTTGGCAAGGAAATATGAAATAACGGACTTGAATGG TACAATAACAGGAGATATGTTTTCAATTAAAAATATTTTATATATACGAG GCAATAATTGGCTTTCATCCTTAATACCATCCTTCATAACCGTTCCTAAG ATTTTCATTCATTATCTATCTAACAAATTTTAAAAAGTGTATCAGAAAGA ATCAGTGTAATTCACTCTATTTTATATATCTATAATGAATTATATAAGAA TAAATCCATGATTTTTGTTTTTGGACCAAAATGCTTAACTATTATATATT ACAAAAATCAAGACTAATTATGTGTGAAAGACATTTCTTACTCAAATAAT CAACGGAGAGATGCCACACACCAACGGCCAAGGTAGTACTAAAATTTGGA TTCAAACTCCTTGCAAATAATAAAAACAAGAAGTGCACATGAATATTTTA AGTTTTGAATAATTAGCCTGCTGGTCAAAAAATTAATTGTAACCCTATTC CCAAGATTATGATAATAATTTTAAGATTATGTAATTAATAGTTGGATATT TATCAATCATAATAATATTTCTCAAAAAATGATGATATCTTATGTAATTA AGAGATAACCGACTCTGCATTACCTAAGAGCTATATTGATTCATATAATT TTAGAAAACATGATGTAACTAAATTGACAAATTAAAAGATGAATTAAATA AATAAATATTCTATTTTCCATGTTTGGCACTAAAGTACTTAACACCATTC TGAGTAGAGGACCTTGCGTATTTTGTAAGAAGAGCTTTTACATTGAGCTT CAAAGTACACAACGAGACAACATAAGGCTTGATTTCCTCCATAGACCACT TTTCCTTAACTCGAAACAAAACATCCAGCCTGGATTGAATCTCATGCGGT AAACTCGTTTCAGGAAAGGATCGTATTGTGGAATTGTTGATCAGAGCAAG TCCTTCTAACTGATGCTTACTCGTTTGAAATCCTTCAGGAACAGAGTCTT GCCAAATCTATTATCGAGTATGAGGTGTTGATGTTTTTTTTTAATAATTA TTAATCTATGAATTAAATTAGTAAGTACCTTCATAAATTCATCCAGATCA AAATTAGTTCCGGAGACTAATATATATTTGCCGTAAAATCTACAAATGAG ATCCTCATTCATAACTCTAATATCTCCTTCGCCTGGAGCATAATAATCAA TGATTTGCCTCAATGTACTCTCAGGTTCATTTTCAGAGAGGACTGAAATT GTCTCCTCCAATCGGAGAGTGGATTCCTTCCAAGATTTTTCTTCAATTAA ATTGTAAATAAGAGTAAGTGTTTTCATGAGATAGTCTTCATCAAGTACGT ACCACTTTTTGTTGATTTCAACACCATGAATGGACTTCAAACCTTCTTTT AATTGACTTTCTGAGGCTTGCACACTGGAATAAGGAGTAAAATAATAAGT AATGACAGTTTATGAATTAGACACACTTGTTTAATAGTTCGACGAAAGAA TATCCTACAGCTTCGCTTTTGTTTGTGGCAGAAAAAGGAGATTTAAGGAG GAGCTCCTCCAATCTTTTGAGTCGGGGTTTAATGGGTGTGAGTTCAAAAT AGCGATTAAAAGATCCATAAACAGGTACATTTTCTAAGGTTCTTTGATCT TCTTGTAATGGTGGTCCAATGTTGGGCGTGAGGAGGAGTGTATTTGAAGT TTCCGCCTCTTTCATCTCAAACGTTGTGCTATGTGTACAAAGAACTGCAG AGTCGTTCGGAACCCCTCTAATTACGAGGGATTCACCCCCATCATCACCA GATAAGACCATCGTATCTAAATAATTAGTTCATTAATATAATGATCAACT ATATGCCTTCGAAACGACCGGAACTTACCCACAAACTCCTTCGGTACATG AACGAGTTTGTACTCGTGTGGATCAAGCATATCCTCGCTAAAATTAAGGA TGTGTGTCATTGGGAGTAATTCATCAGGGTCTAACTTGGCGATGCGTAGT AGGTTGTTGACTTCCTCCAAAGTTTTCTCCGAAGTCATGATCCGTAATTT AATTAATTAATAGACAGAGCGATTGGACGCAGGATTCCCTCTTTTTA
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