EMLSAT00000006456, EMLSAT00000006456-702303 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006456
Unique NameEMLSAT00000006456-702303
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s353supercontigLSalAtl2s353:262181..263762 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006456 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006456EMLSAG00000006456-689222Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028187EMLSAE00000028187-737115Lepeophtheirus salmonisexon
EMLSAE00000028188EMLSAE00000028188-737116Lepeophtheirus salmonisexon
EMLSAE00000028189EMLSAE00000028189-737117Lepeophtheirus salmonisexon
EMLSAE00000028190EMLSAE00000028190-737118Lepeophtheirus salmonisexon
EMLSAE00000028191EMLSAE00000028191-737119Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775496auto775496Lepeophtheirus salmonispolypeptide
EMLSAP00000006456EMLSAP00000006456Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006456

>EMLSAP00000006456 ID=EMLSAP00000006456|Name=EMLSAP00000006456|organism=Lepeophtheirus salmonis|type=polypeptide|length=347bp
MSFVEFLNPVADIFSSEIRNDDWIFRLHHFVTVSGLLSFCILMTISQYVG
TPMHCTETGKMDESTFNTYCWIHGVETKGDWVAKSPQHLNCDNNSCWHHN
YYQWVVFVVIIQASCFYLPKFIWDYNEGGRIQSLLDKIDRKTIISLTKED
KLEFSDSISNIIDYMHGNLGKHKGWAFVFYACEMLNLINVLAQFHFTDLF
LGGRFIELTLNGLSVDDSSGFLPLTGKCNYFKYGSGGERETYEGICVLPL
NLINQKFYILFGLWLSFLALASAFSVTLRLLLIVSLELRRFFLGYVYGWH
RSGFSKKCKHLENLDHGDWFLITRILQNMSGITRYLFLEQLEGGCEI
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mRNA from alignment at LSalAtl2s353:262181..263762+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006456-702303 ID=EMLSAT00000006456-702303|Name=EMLSAT00000006456|organism=Lepeophtheirus salmonis|type=mRNA|length=1582bp|location=Sequence derived from alignment at LSalAtl2s353:262181..263762+ (Lepeophtheirus salmonis)
ACAAATGTATGTTCATGAACATGTGACTCCTATCTTGTCTCTCCTACTGT GAAATTTGTCAAATTTATGTCTATCTTTCATTTGCTATATGGAAGTGCTA TTATTATTCACCCTCGATGATTAATAATATTAAACGAGTGAAAAATTGAT AAAACTACAACGTTTGTTTACCTCTTCCTGTGTTTATTCTCAATTCGAGT CATGTCCTTTGTAGAGTTTTTAAATCCCGTAGCTGACATTTTTTCTTCGG AAATTCGTAATGATGATTGGATATTTCGACTTCATCACTTTGTGACTGTT TCTGGGCTTTTGTCTTTTTGTATTCTTATGACCATTTCACAGGTACGTTG GTAATTAAATAATTATTACGAATCACTTTAAACTTAATTAACACTTGCAT TTAATTATAAGTATGTTGGAACACCTATGCATTGCACAGAAACGGGAAAA ATGGATGAGAGTACTTTTAATACCTATTGTTGGATACATGGAGTAGAAAC AAAGGGAGATTGGGTTGCCAAGTCTCCTCAGCATTTAAATTGTGATAATA ATTCATGCTGGCATCACAACTATTATCAATGGGTTGTTTTTGTCGTTATA ATTCAGGCTTCTTGCTTCTATTTACCAAAGTAATGGCTTTAATATTCAAA ATAAACGATTTTGTAAGTTCCCGTGTCTTTTGCTCAAACAGATTCATTTG GGATTACAATGAAGGAGGAAGAATACAATCCCTCCTTGACAAGATCGATA GAAAAACTATAATATCATTGACGAAAGAAGATAAACTCGAATTTTCAGAC TCTATATCCAACATCATCGACTATATGCATGGCAATCTAGGAAAACACAA GGGATGGGCCTGTAAGAAGTGTACCTATTATTCGTTCAAATAACAATTTA ATTTATCTAATTAATAGTTGTGTTCTATGCCTGTGAAATGTTAAATCTAA TTAATGTTCTTGCGCAATTTCATTTCACGGATCTCTTCCTTGGGGGTCGT TTCATTGAATTAACTCTAAATGGTCTTTCTGTGGATGATTCAAGTGGGTT TTTACCACTTACAGGAAAGTGTAACTACTTTAAATATGGTTCAGGTGGGG AACGAGAGACTTACGAAGGGATCTGTGTTCTTCCACTTAATTTGATCAAT CAGAAATTTTACATTCTTTTCGGTCTATGGTTAAGTTTTCTAGCTCTAGC CTCTGCCTTCTCTGTTACTCTTAGACTTCTCCTTATCGTTTCTTTAGAAT TAAGGCGTTTTTTCCTTGGCTATGTGTATGGATGGCACAGATCTGGCTTT TCGGTAGGMAAAAATAACAAAATTGTTAAATATGAGTATTTTGTATTGCT GTTTTCCCAACATTTTATTGTAGAAAAAGTGTAAGCATTTGGAGAACTTG GATCATGGTGACTGGTTTCTTATAACTCGCATACTTCAAAACATGAGTGG AATAACTCGATATTTATTTTTGGAACAGTTAGAAGGTGGTTGTGAAATAT GAACTAATTAATTAATTATTAGTAATCCTTGAAAATTATACATTTAATGT TTAAATAGAAAAATATATTATGTATTCCAACA
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