EMLSAT00000006461, EMLSAT00000006461-702308 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006461
Unique NameEMLSAT00000006461-702308
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s353supercontigLSalAtl2s353:308961..310825 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006461 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006461EMLSAG00000006461-689227Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028225EMLSAE00000028225-737153Lepeophtheirus salmonisexon
EMLSAE00000028226EMLSAE00000028226-737154Lepeophtheirus salmonisexon
EMLSAE00000028227EMLSAE00000028227-737155Lepeophtheirus salmonisexon
EMLSAE00000028228EMLSAE00000028228-737156Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776179auto776179Lepeophtheirus salmonispolypeptide
EMLSAP00000006461EMLSAP00000006461Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006461

>EMLSAP00000006461 ID=EMLSAP00000006461|Name=EMLSAP00000006461|organism=Lepeophtheirus salmonis|type=polypeptide|length=133bp
MTFANRIKIIKANLEDPDELEKKVSQAILDLELNSDLKAPLRELYITAVK
EIEVGDKKAYVIFVPVPQLKAFQKIQPRLVRELEKKFNGTHVVFVAQRRI
LPKPTRKANKLKQKRPRSRXLTSXHSCILDDLV
back to top

mRNA from alignment at LSalAtl2s353:308961..310825+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006461-702308 ID=EMLSAT00000006461-702308|Name=EMLSAT00000006461|organism=Lepeophtheirus salmonis|type=mRNA|length=1865bp|location=Sequence derived from alignment at LSalAtl2s353:308961..310825+ (Lepeophtheirus salmonis)
AGTTTTATTATTTCCTTTCATCTTCCTTTTCCGGACAGGATTCGATCCGA AGGTACGTACATTTTTCTGCTCTCAAGTCTTAAAAAATACTCCCTAATGA ATGGACACGAGATTTACACATCTCTACGAGATGATTTTTACCCGATTATC TCATGTGATGACTGAGATATTAATGGATTTCTTCTTGTTCTTTTATCACA GATGACATTCGCGAACCGAATCAAGATAATTAAGGCCAATCTCGAAGATC CTGATGAGCTCGAAAAGAAAGTCTCTCAGGCCATCTTGGACCTTGAACTC AACTCTGATTTAAAGGCTCCACTCCGTGAGCTCTACATTACCGCAGTTAA AGAGATCGAGGTTGGAGACAAAAAGGTAAGAAAGAAACATTTCGAGTTTT GTCTGTGCGAGGTCCCAGTGAGAGCTGAACTTGATAATAGTGTTCATCTC TTAACAAACTAATATTTCGCTAGAGTAAACTCCATTAGAGCTGTCCAAGT TCCCGTTTGGCTATTTATGCCCGGGTATATTCAGGCTCCAAACAATTTCA TTTCCATGTATAACTGTTGAGTTGAACGATGTCCATGATTGATGACTCAA TTCTATCTCTTTGCATTTCAGGCCTATGTAATCTTTGTCCCAGTTCCCCA ATTAAAGGCCTTTCAGAAGATACAGCCTCGTTTAGTTCGCGAATTGGAAA AGAAGTTTAATGGAACACATGTCGTTTTTGTTGCCCAACGGCGTATTCTT CCCAAGCCCACAAGAAAGGCCAATAAACTCAAACAGAAAAGACCTCGCAG TCGGKCTCTTACTTCTGRCCACAGCTGCATTCTAGACGATTTAGTTTARC CTGCCGAGATCGTGGGAAAGAGAACTAGAATTCGTCTTGACGGATCCAGA CTCTTCAAAATCCACTTGGATAAAAATCAACAAACCAACATTGAACATAA GGTGATTATTTATGCAATTAAATCTTAATCGATCTTACATTTCATATRCT TTTTTTTTTTTTTTTTCTAGACCGGGGACTTTTTGGCGCTGTCTATAAGA AGTTGACTGGGAAGGAAGTTTCCTTCGAGTTCCCTGAGGCTTACCTATAA ACTTTTTGTTGGATATATTAAATATTGCTACAATAAACCCTTAAAAAAAG TGTTTTCCTTGCTTATCTTTCGCCTATGTTATTTTTTTTTAAATATCAAA AGAGATTGGTTCTCTTGTAAGTCGTAGAAAGCCTTTTTTTCTCTCTCATG GCACATGATACTCTCACAAGGTTGTGGTTTTTTTAAATTTATATATGTAT ATATATAGTTTTTTTAGTTTTCATGGTTGAACTTGCTTCGTTCCAAGTCA ATATGACATAACGTCATTCATTGATAAGGTAAAATATACTAATAGAACCC ATTCTTGCTCATGTTTTGGTGTACTCTATTTTGTGATATTAGGGCATAAT GTTCAATAGTTAAATATATGCATATCTGCTCTAAAGTGCGTATTAATGTT AATTAGGGCTGGATAATGAAGGTAAGGTTTGTCATGTTTGTCTTTTTCTA CTTAATACGCGTTATAAGCTATATTCCTTGATACAACCAATTTAAGCTTG AATTGATCTGTAATTAAACATACCACCAGTATACTATTGTATATCAATGG CATAATATATCTAATATTCTTGGAGCATTGTCGACAAAATGTGATGTGGG TCGCATGCTAAGCTTCGATTCTACTAAAAGTGGGATTAAAAAAAGTTTAA ATTTGTAATTCTGTGAAAAAAGTTGTAACTATATTGCTGCAGTTAAAATC TACTGATTATTATTCATTTTATTCAGTAATAATGAATGCGAAGGTCTTCG TACTATTTTCTCCCG
back to top
Add to Basket