EMLSAT00000006467, EMLSAT00000006467-702314 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006467
Unique NameEMLSAT00000006467-702314
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s353supercontigLSalAtl2s353:350776..353446 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006467 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006467EMLSAG00000006467-689233Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028247EMLSAE00000028247-737175Lepeophtheirus salmonisexon
EMLSAE00000028248EMLSAE00000028248-737176Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776718auto776718Lepeophtheirus salmonispolypeptide
EMLSAP00000006467EMLSAP00000006467Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006467

>EMLSAP00000006467 ID=EMLSAP00000006467|Name=EMLSAP00000006467|organism=Lepeophtheirus salmonis|type=polypeptide|length=238bp
MTMESQIEPENESSFGPNFKILPSTNQVNGLHTLIRDKNTSRGDFKFGAD
RLIRMXIEEGLNQLPYSEEEVITPTDAVFKGIKFEKGNCGVSIVRSGEAM
EKALQDCCRSMRIGMSKLIFFILYMLFELFVYLLIGKILVDHDRVIFAKF
PSDIADRKVLLLYPIMKTGTKVSRSLRVLIDDSNVPQEHVILINLFCTPV
AAQRVTSEFPKLKILTSELHSVVPDHFGQKYFGTENTF
back to top

mRNA from alignment at LSalAtl2s353:350776..353446+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006467-702314 ID=EMLSAT00000006467-702314|Name=EMLSAT00000006467|organism=Lepeophtheirus salmonis|type=mRNA|length=2671bp|location=Sequence derived from alignment at LSalAtl2s353:350776..353446+ (Lepeophtheirus salmonis)
CTTTTTTAAAAGCTAGTCGCCAGGTGTCAGGACCGTACATTAATTGGACG TTTGTTATTATTAAATTACAATTTTTACAATAATAAAAATACATTCAGTA TAAAAACATTGGAACAGTTGATGTGATGTCAGTCGTATAACCTGATTGAG GTTTAGTATTACTTTTTTACAATTCACTCGACGTGTGACAAGATCGAATA CGAAAATGACTATGGAGTCCCAGATAGAACCCGAGAATGAATCATCTTTT GGCCCGAATTTCAAAATTCTTCCATCTACAAATCAAGTCAATGGTCTTCA CACGCTCATAAGAGATAAAAATACGAGTCGAGGAGACTTTAAATTTGGAG CAGATCGGCTGATTAGAATGGKGATTGAAGAGGGACTCAATCAGTTGCCA TACTCTGAAGAGGAAGTTATTACTCCCACAGATGCTGTATTCAAAGGCAT AAAATTTGAGAAGGGAAATTGCGGTGTTTCAATTGTTCGATCTGGTGAAG CAATGGAGAAAGCTCTCCAAGATTGTTGTCGATCCATGAGAATAGGAATG TCCAAACTAATATTTTTCATTTTATATATGTTATTTGAATTATTTGTTTA TTTATTAATAGGCAAAATATTAGTGGATCACGATCGTGTCATCTTTGCTA AATTCCCTTCAGATATTGCGGATAGAAAGGTTCTTCTACTTTATCCAATA ATGAAGACAGGTACCAAAGTATCAAGATCACTTCGTGTGTTAATAGATGA TTCCAACGTGCCTCAAGAACATGTCATACTCATCAATCTCTTTTGTACGC CAGTAGCTGCCCAAAGAGTCACTTCCGAATTTCCAAAACTCAAAATCCTT ACTTCTGAACTTCATTCTGTTGTACCCGATCATTTCGGACAAAAATACTT TGGAACTGAGAACACGTAAATTTTTTCTGTATAAATCATCATGTCAAATA GATTTTTCAAAATTTCCTTTCAAACAAATTAATATTTTTGGTTTACTTTT AAACATGGCATATCATTGCATTATGTCTATTATATTACTAATATGAAATG ATGGTTACTTAATGTTGGACTTAATAAGTTTTAAGTATTATTTAATAATT GTTACCAAAATGTTATGCATTTATAAAGTGAAACTTTCACATCATTTATT TGTCTTGTTTCCATACATTACTACAAAACCCTTTAATCGTACATATATTC AATTTTACAGATTTTAACATAAATACACGCAAAGGGCTCTTTATGAACTC ACTCAGCACATAATTTTTAATTCAGAAATTCAATGAACAGTTATTTCATT TCGAGTTCAAGAAATTTTGTGAAGCTCACTACAGTAACAATTCCTTGCAT GTTTGAGTATCAAATTATTCATTTGTCAGCATTCGATAATTAAAATAAGA CTTAATCAATGCAACGTGGTAGGTTGAAAAAAGAGAAGATAATATTAAGT TTCCTACATCACCTGAGATTTTTGCTAAGTGAATATTCAATTTGGAGGAT AAATTTAGATGGATTTGAATAAGGAGAGGTTATACAATTGTTTCAAAGAA GTCTTAATGTTATAGAAACCCTTCGTACATACATAATATCATCACGTGTA ATTAATTTTAATACTATAAATGTAACAGTAAAATAATATGTTTCCTTCCT TGGTTCTATAATATGAAATTGACACCATATTTATAATAAATAATCAAATT TCAGTCGGCAACATAATAAATACTGGGAAAATATATTTTCAGTGATTATA TTTAAAAAAAAACAGTCAAAAAATACGTATTAATCAATATTAGATAAAAA GAATATATAAGCTATTTCTGAGAGAATTAGGTTAAGAAAATAGTGTAGAC CGCGGCATAATTATTAATCAACCTCTCCACAGTCTTGAATCGTTACTTGT TTTGAGGCTCTACCATTGCGTGAACCTACAGATTCCATTTTTTTGACAAT ATCCAAACCTTCAACAACACTTCCAAAGACAACATGGGCACCATTCAACC AGTCTGTTTTGGCAGTACATATAAAAAATTGAGATCCATTTGTATTTGGG CCAGCGTTAGCCATGGAAAGAATCCCAGGTCCTGTATGTTTTAAGTCAAA GTTCTCATCAGGGAATTTCTCTCCATAGATGGACTTTCCTCCGGTACCAT TGTGATTAGTAAAATCTCCACCCTGACACATGAAGCCTGGTATAATACGA TGGAATGATGAGTTTTTRAAGCCATAACCTTTTTCTCCTGTACATAGGGC TCGAAAGTTATCCGCAGTTTTAGGAACTACGTCAGATCGGAGTTCAAAAA CAATACGTCCTTCATTTTTTCCACCAATATCGATGTCAAAAAATACTTGC GGTAACTTAGATGACGAATCAGCGGAGTAAAACCGGAGTCCAATCTTGGC TGTGCCATGAATTGAAAAAATAATAAATTAATTAATATCTAATTATAATT TATTCATATCAATGATAAATAAAATAACTGACAAAACTTACAAGGTAATA ACTTATTGTTAATACAACTCCTAAATGCATTCCGCGTCACGAAACCGATG ACCATTATGAAAGAATTACTATTAGTATTTAATTAGGAAATAAACAATGA GGATTACAAATTACTCAACACTTTGAACATAAACGTGCACAACGCTTACA ACATACAATTGTACAATAACG
back to top
Add to Basket