EMLSAT00000006468, EMLSAT00000006468-702315 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006468
Unique NameEMLSAT00000006468-702315
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s353supercontigLSalAtl2s353:352639..353330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006468 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006468EMLSAG00000006468-689234Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028249EMLSAE00000028249-737177Lepeophtheirus salmonisexon
EMLSAE00000028250EMLSAE00000028250-737178Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776750auto776750Lepeophtheirus salmonispolypeptide
EMLSAP00000006468EMLSAP00000006468Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006468

>EMLSAP00000006468 ID=EMLSAP00000006468|Name=EMLSAP00000006468|organism=Lepeophtheirus salmonis|type=polypeptide|length=199bp
MVIGFVTRNAFRSCINNKLLPSKIGLRFYSADSSSKLPQVFFDIDIGGKN
EGRIVFELRSDVVPKTADNFRALCTGEKGYGFKNSSFHRIIPGFMCQGGD
FTNHNGTGGKSIYGEKFPDENFDLKHTGPGILSMANAGPNTNGSQFFICT
AKTDWLNGAHVVFGSVVEGLDIVKKMESVGSRNGRASKQVTIQDCGEVD
back to top

mRNA from alignment at LSalAtl2s353:352639..353330-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006468-702315 ID=EMLSAT00000006468-702315|Name=EMLSAT00000006468|organism=Lepeophtheirus salmonis|type=mRNA|length=692bp|location=Sequence derived from alignment at LSalAtl2s353:352639..353330- (Lepeophtheirus salmonis)
ATGGTCATCGGTTTCGTGACGCGGAATGCATTTAGGAGTTGTATTAACAA
TAAGTTATTACCTTGTAAGTTTTGTCAGTTATTTTATTTATCATTGATAT
GAATAAATTATAATTAGATATTAATTAATTTATTATTTTTTCAATTCATG
GCACAGCCAAGATTGGACTCCGGTTTTACTCCGCTGATTCGTCATCTAAG
TTACCGCAAGTATTTTTTGACATCGATATTGGTGGAAAAAATGAAGGACG
TATTGTTTTTGAACTCCGATCTGACGTAGTTCCTAAAACTGCGGATAACT
TTCGAGCCCTATGTACAGGAGAAAAAGGTTATGGCTTYAAAAACTCATCA
TTCCATCGTATTATACCAGGCTTCATGTGTCAGGGTGGAGATTTTACTAA
TCACAATGGTACCGGAGGAAAGTCCATCTATGGAGAGAAATTCCCTGATG
AGAACTTTGACTTAAAACATACAGGACCTGGGATTCTTTCCATGGCTAAC
GCTGGCCCAAATACAAATGGATCTCAATTTTTTATATGTACTGCCAAAAC
AGACTGGTTGAATGGTGCCCATGTTGTCTTTGGAAGTGTTGTTGAAGGTT
TGGATATTGTCAAAAAAATGGAATCTGTAGGTTCACGCAATGGTAGAGCC
TCAAAACAAGTAACGATTCAAGACTGTGGAGAGGTTGATTAA
back to top
Add to Basket