EMLSAT00000006492, EMLSAT00000006492-702339 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006492
Unique NameEMLSAT00000006492-702339
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s355supercontigLSalAtl2s355:292450..295326 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006492 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006492EMLSAG00000006492-689258Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028363EMLSAE00000028363-737291Lepeophtheirus salmonisexon
EMLSAE00000028364EMLSAE00000028364-737292Lepeophtheirus salmonisexon
EMLSAE00000028365EMLSAE00000028365-737293Lepeophtheirus salmonisexon
EMLSAE00000028366EMLSAE00000028366-737294Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775953auto775953Lepeophtheirus salmonispolypeptide
EMLSAP00000006492EMLSAP00000006492Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006492

>EMLSAP00000006492 ID=EMLSAP00000006492|Name=EMLSAP00000006492|organism=Lepeophtheirus salmonis|type=polypeptide|length=200bp
MGKKKAKSTLSREERMVLCVSDIIQELIKANDEGKDVNLNRMKNQISSKY
QLSTXPRLVDIIXAVPLEYKKTLLPKLKAKPVRTASGKSNNKCIGITIET
RPDYCLKRHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQ
QAKDAGFKVVSHMMPNLPNVDLDRDIDQFVSLITGLEYLIENKASSIYFQ
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mRNA from alignment at LSalAtl2s355:292450..295326-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006492-702339 ID=EMLSAT00000006492-702339|Name=EMLSAT00000006492|organism=Lepeophtheirus salmonis|type=mRNA|length=2877bp|location=Sequence derived from alignment at LSalAtl2s355:292450..295326- (Lepeophtheirus salmonis)
ATGGGAAAGAAAAAAGGTAATCGAATGTTTGACTTACGAGAGATCCCATC
GTAAAAGAATGCAATTGGCAATTCAAATTATAATGACTGTCAGAAATGAC
TTAAGTTTGGAAATATTAAATATATGATATTTTTTGAAAATAATTTAAAT
CGTTAATAATATTAATTTTGCAGCAAAGTCTACGCTAAGTCGAGAGGAGC
GAATGGTTCTGTGTGTTTCAGATATAATTCAGGAACTTATTAAAGCGAAT
GATGAAGGAAAAGATGTGAATTTGAATCGCATGAAGAATCAAATTTCCTC
CAAGTATCAATTGTCTACAKCCCCTCGACTTGTTGATATCATARCCGCCG
TTCCCCTTGAGTATAAAAAAACTTTACTTCCAAAACTAAAGGCGAAGCCT
GTTAGAACTGCATCTGGAGTAAGCTATCACACATATCTATACTATAATAT
TTAATAATTATTTTACGAATTAATAATGCAATGTTATTCTAAGATCGCTG
TCGTCGCTCTTATGTGCAAACCTCATCGATGTCCTCATATCAGTATGACT
GGGAATATATGTGTTTATTGTCCTGGAGGACCTGATTCAGATTTCGAATA
TTCTACTCAGTCCTATACTGGCTATGAACCTACTTCAATGAGGGCTATTC
GAGCAAGATATGATCCATTTCTACAAGCAAAGCACCGTATAGACCAGGTC
AATAATTTATAATATTGCTCTTAAATATAATTACCATGGTAATTTTTTAC
AGTTGAAGCAACTAGGACATAGTGTTGATAAAATCGAGTATATAATCATG
GGTGGTACGTTTATGTCTCTTCCGGAAGATTATAGAGACTATTTTATTCG
TAATTTGCACGATGTTCTCTCTGGTCATATTTCCAATAGTGTCGAAGAGG
CTGTGAGGMAGTTTTAAAACATCCATAATATAATTTTAATGCATTGATAT
TGATTTCTAACAGATATTCGGAGAAAAGTAATAACAAATGTATTGGTATT
ACGATTGAAACACGTCCCGATTATTGTTTAAAACGTCATTTGAGTGATAT
GTTAAATTATGGATGTACTCGTCTTGAAATTGGGGTCCAATCAGTATATG
AAGATGTGGCACGTGATACTAATAGAGGGCATACGGTACGTGCCGTATGT
GAAAGTTTCCAACAAGCTAAAGATGCTGGGTTTAAAGTAGTGTCACATAT
GATGCCTAATTTACCAAACGTGGATTTGGATAGAGATATTGATCAATTTG
TGGTGGGATAAGGGTTTTCTTTTATTTATTTTACATCAATCTAGTATTAT
TTTCATAGGAATTTTTTGAAAACCCTGCATTCAGACCCGACGGCTTAAAA
ATTTACCCAACTCTGGTAATTAGAGGTACCGGCCTATATGAATTATGGAA
AACGGGAAAGTACAAATCATATCCTCCCGACGTACTCATCGATCTAGTGG
CTCGTATTCTTMCTCTTGTTRCTCCKTGGACGCGTGTATATCGTGTACAA
CGTGATATACCAATGCCTCTTGTAAGTTCAGGTGTTGAACATGGAAATCT
CCGCGAATTAGCTCTGGCACGAATGAAAGATTTTGGTACAACTTGTCGAG
ATGTTAGGACCAGAGAAGTTGGAATAAAGGAAATACATAATAAAGTCCGT
CCAGAAGAAATTGAACTTATTAGACGAGATTATGCGGCCAACGGGGGTTG
GGAAACATTTTTGTCTTATGAAGATCCTGAACAAGATATCCTTATTGGTT
TACTAAGACTAAGAAAACCTTCTGATGAAGTGTTCAGGTAAATTATTTTG
ACTTCATTTTTAAGTATTCTAGTTATATAAATAACTTCCATTTACAAAAG
TTGTATTTTTATTAATGTGGGGCTATAAAATCAATTAGCTTAAAACAACT
ATAACTACATTTATAGCAGTATTGTTAAAATTTAATTTCTATTCAAAGGA
TGTTTTCAAAAATTTGAATTAAAGTTAATCATTTTAATCTTAACAATTGT
TTTAGGGAAGAATTATATAAGTAGGTAGTGTAGGGGTTTTGAAATAGTGA
ACACGACCTTCAATTTCCGGACCTACTGCACCATGTTTCTTATATTTTGC
AGGCCAGAGTTAAAGGAAAGATGTTCTATCATTAGAGAATTACATGTCTA
TGGAAGCGTAGTACCAATTAGTTCACGTGACCCTAGAAAGTTTCAACATC
AAGGCTACGGAACGCTTCTCATGGAAGAAGCTGAAAGAATAGCTAAGGAA
GAGCACTTCGCTAAAAAAATATCTGTTATTTCTGGTATTATTCATGTATT
TCATTTATTATTAAATATCAATATAAACTTTTCAAATTTAGGTGTCGGCA
CAAGAAATTATTATCGAAAATTGGGTTATGAGCTTGACGGCCCATATATG
TCAAAAAAACTATGTTAAAATAATGGATGGAGACATGATTTAAAAAAAAA
ATACATTATACAAAGGATATTCAATTGTCTAATCTATGAAACCCTATTTT
CCAACTTTGTACGTATACCTTGATCGTTTTCATATTTCTTAGCTTAATGA
GTGGGAGTCCTTCCAATCATAGCTTTTTGAGAGTTTTTTTATTTCATGCT
TGAGGAATATAATAATAAAAATATCAACTAAAAATAATTTTTTAATTATG
TCAATAATATATCTTGGAATGACAATATATGTGGGGTTAAGGGTTCTCCT
ATAAATTAGGGGTTAGAAGACTTAGTATTTTTAAGATATATTTTATGCGG
GATTGTGCGTTGGACATGCTTTATTTAGTAAGGTTGTGTGTAATATATTT
TTAATCTTAATAAGAGTTTGATCACGGGCTTGGAATATTTAATTGAAAAT
AAAGCCTCATCCATATATTTTCAGTAA
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