EMLSAT00000006508, EMLSAT00000006508-702355 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006508
Unique NameEMLSAT00000006508-702355
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s356supercontigLSalAtl2s356:707060..708449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006508 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006508EMLSAG00000006508-689274Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028436EMLSAE00000028436-737364Lepeophtheirus salmonisexon
EMLSAE00000028437EMLSAE00000028437-737365Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779410auto779410Lepeophtheirus salmonispolypeptide
EMLSAP00000006508EMLSAP00000006508Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006508

>EMLSAP00000006508 ID=EMLSAP00000006508|Name=EMLSAP00000006508|organism=Lepeophtheirus salmonis|type=polypeptide|length=250bp
MLLNLFILLSLQISWVSPQNNFETCSAKQQEMILSRILSCRPIETVIPLD
YPFNDTYSLMKPTHVSVKRCQGSCFSNNCIAKQIINRNVDVLYFPRSSNP
DGTISPICSSVIVQDHITCGCGXSIXADECTDTGMDIRVYLPGECRCACR
DVSKRGNCLKQGNFWNFQTCECMCQNPNSWPICPTGYSFDFNVGACHCVP
PAEVASILLEIALVLAFVSGIIILWAVFKYATQARATSRVRVRPXLYRHF
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mRNA from alignment at LSalAtl2s356:707060..708449+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006508-702355 ID=EMLSAT00000006508-702355|Name=EMLSAT00000006508|organism=Lepeophtheirus salmonis|type=mRNA|length=1390bp|location=Sequence derived from alignment at LSalAtl2s356:707060..708449+ (Lepeophtheirus salmonis)
TGAGGACTGCCTTTAAAGCGCACTCCTTGCCATAGTACATAAATAATATG
AGTATATGACTTTAAAAAATTTCAAGCCAATAGTCATGTTCATTCTTCAC
CACTGTGAAAATGTTGCTGAATCTATTTATTCTACTTTCCCTCCAAATAT
CATGGGTATCACCTCAAAATAATTTTGAAACATGCTCTGCGAAACAACAA
GAGATGATTCTAAGTCGTATTCTTAGTTGTCGACCCATTGAAACCGTCAT
TCCTCTCGACTATCCCTTTAATGACACATACAGTCTCATGAAACCGACGC
ATGTGTCTGTTAAAAGATGTCAAGGCTCATGCTTTAGTAACAAGTAAGGT
ATCATAGCTTAAAATTAATTATATGCTCATTTAAAGTATATTTAATTAAA
AAAAATATTATTATCATGTCAGTTGTATAGCGAAACAAATCATAAATCGA
AACGTGGATGTACTTTACTTCCCAAGAAGCTCAAATCCTGATGGAACTAT
ATCCCCTATCTGTTCTAGTGTAATTGTTCAAGATCACATCACCTGTGGTT
GTGGATGSTCCATTMCGGCCGATGAATGCACCGATACGGGAATGGATATT
CGAGTATATCTACCAGGAGAGTGTCGATGTGCATGTAGAGATGTTTCAAA
ACGTGGTAATTGCTTAAAGCAGGGCAATTTTTGGAATTTTCAAACATGTG
AATGTATGTGTCAAAATCCTAACTCTTGGCCAATATGCCCTACTGGATAT
AGTTTTGATTTCAATGTTGGAGCTTGCCATTGTGTACCTCCAGCGGAAGT
TGCTTCTATTTTATTAGAAATTGCACTGGTTCTGGCTTTTGTGTCTGGAA
TTATAATCTTATGGGCCGTATTTAAGTATGCTACGCAAGCTAGAGCTACT
TCTCGTGTTCGTGTTCGTCCCAANTTATATCGCCACTTTTAGAAATAGAC
TTTTTTCTCGAATGGAGTCCGAGGATGATGGTGAAGAACGTGAGGAATTG
AAATTTTTTGTTAGACAATCTTAAAGAATTAAGAAGAAATAATATTTGAA
TTAAGAGGTTAATCTCTATATAAAAGGTGTGGTTGCCAAGTGTATGGAAT
CGATAGAGAAGCCACCTTATGTCTTMTGCCCAAACTCKTAGAGAAAGAWG
AATTTTTCTAAATTCATTCTGATTGAAATTATATTAAAGGATGCTGAGCC
ATTTAATTAAGTGTATTTTGTGCCAAATATAGTTTATTTTCATCATAAAT
GTTGTAGTATTATATTTCAATGACTAAGAGTCTGACGCAATCCCAATGCA
CCTCTAAGCAGGTAGATAGATACATATCATGTAGTTCGTCAGCAATAAAG
CAAGCTATATGTTTTTCCAAAAATTGAGTCAAGATTTCTG
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