EMLSAT00000006524, EMLSAT00000006524-702371 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006524
Unique NameEMLSAT00000006524-702371
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s357supercontigLSalAtl2s357:373959..378480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006524 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006524EMLSAG00000006524-689290Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028510EMLSAE00000028510-737438Lepeophtheirus salmonisexon
EMLSAE00000028511EMLSAE00000028511-737439Lepeophtheirus salmonisexon
EMLSAE00000028512EMLSAE00000028512-737440Lepeophtheirus salmonisexon
EMLSAE00000028513EMLSAE00000028513-737441Lepeophtheirus salmonisexon
EMLSAE00000028514EMLSAE00000028514-737442Lepeophtheirus salmonisexon
EMLSAE00000028515EMLSAE00000028515-737443Lepeophtheirus salmonisexon
EMLSAE00000028516EMLSAE00000028516-737444Lepeophtheirus salmonisexon
EMLSAE00000028517EMLSAE00000028517-737445Lepeophtheirus salmonisexon
EMLSAE00000028518EMLSAE00000028518-737446Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777002auto777002Lepeophtheirus salmonispolypeptide
EMLSAP00000006524EMLSAP00000006524Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006524

>EMLSAP00000006524 ID=EMLSAP00000006524|Name=EMLSAP00000006524|organism=Lepeophtheirus salmonis|type=polypeptide|length=681bp
MKSHIFLFALASSYLLLSSSAVEVEERESGLKIEIHEKPEECSKMAKNGD
MLSMHYTGTLEDGTTFDSSRDRNEPFSFQIGVGQVIQGWEEGVLGMCVGE
KRKLIVPSEMGYGEKGAGDVIPGGATLHFDIELIDIGSGPPPTNVFKQID
TDNDKHLSRDELSAYLKVQIDQMKTEEDEPTDEAKKLMSDQGKLVEEVFA
HEDKDKDGLISFEEFSGLSVNEIKSVTHDKEPSETTQVVTPSTTTGSPKS
PNKKLNTRVFSARHRLRNVLLEKYDKEVHPVSNHSDTVVVSVGMSLIHLD
INELKSTMDVDAWMRFTWIDEYLSWDPSDYENLTKIHFSEDEIWQPDILP
YNNANPESLNPYHKTSFLVHHTGDVLWVPPVHLKAFCRLDLKMWPLDTQT
CSLKFGSWTSHANQIDLALFKNATVVEKIDFYTKDREWVVLNTTVVKNSV
SYVEHPDIYADITFSFNMKRISQSYKYVIILPCLVTMLMSTCSFGLPSNS
HEKLFLNGIAFIVCVLYLVYFATILPFQSSTVPILVKFYSNTVVLIGAAI
VINVIVLNMTQVRKHVYPPKFLRIIFAGPLGKCLCLDHXRHQISSTHTRL
QVNNELIDMAESXQPPDLSQRRTISSNDGLTRINSMEEDENDYIFSGNDI
MGEWILVAAGIEKICLFTYALSFSIVTYSYS
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mRNA from alignment at LSalAtl2s357:373959..378480-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006524-702371 ID=EMLSAT00000006524-702371|Name=EMLSAT00000006524|organism=Lepeophtheirus salmonis|type=mRNA|length=4522bp|location=Sequence derived from alignment at LSalAtl2s357:373959..378480- (Lepeophtheirus salmonis)
ATGAAGTCCCACATCTTTCTCTTTGCCCTCGCCTCCTCCTACCTCCTTCT
CTCCTCCTCAGCCGTGGAAGTGGAAGAGAGAGAATCGGGMCTCAAAATTG
AGATCCATGAGAAACCGGAAGAATGTAGCAAAATGGCCAAGAATGGGGAC
ATGCTCTCCATGCATTACACAGGAACTCTTGAGGATGGAACTACATTTGA
CTCTTCTCGGGATCGAAATGAACCCTTTTCCTTCCAAATTGGCGTGGGAC
AAGTAATTCAAGGATGGGAAGAGGGTGTCTTAGGTAAAGAATCCTCTCAC
AATTCTACACTTAATAGAATACGTCTCGCCTCTTTCAATCCAATAGCTTC
AATTCATTCTTTTTCTTGTATTATTTGAAAGGGACATGTGCTTTCATAAG
GAACACTGCCCATGTATTCAACTTATTTTTAAAGCCATAGGAGATCCCGT
TTCGTTTTATCCCAAATAATAATTAATATTATTCATTCCTTAAAACTAAA
AGGGAAAATTGTAATGGTAAAAATTTAACACGATTACTATTCTATATAGT
GCCTTTCAGTACGTACATATCTATCAATGACAGGTAGTTAGTTTCCTCCT
ACTTGTATTAAATTTTTAATGTACCTATTCTGTGTTAGGAATATTGTACT
CATCATGTGTATAATATGATTCTNCTTACCCCCTATTGGAGGCGTTTAAA
GCTCTTTAAATATTAATAATATAGTACTATTGAAATAAGAAAATAACGTA
TCAAATAGTAGCTATTCGATATTGTTTGATGAAATAATTATAACATCACA
CATTGTCTCTCTGTTAAATTATATATTTCTCTGATGTCAAATAGTAGTAT
ATGTTATCATTAATTATTCACAACTATCCTCATTAATTAATTTATTTTTT
CTTTCGAAGGTATGTGTGTGGGAGAAAAACGTAAGCTCATTGTGCCCTCA
GAAATGGGCTACGGCGAAAAGGGTGCTGGAGACGTCATCCCAGGTGGAGC
TACTCTTCATTTTGACATTGAGCTCATTGATATTGGTTCTGGACCCCCAC
CAACCAATGTCTTCAAACAAATCGACACTGACAACGATAAGCACTTGTCA
AGAGATGAGCTCTCTGCCTATCTGAAAGTTCAAGTATGTTAATAGTATAT
AATTATTATCCTGGCAAGTTTTTTCTGATAATTAATTTTCCTTTCGTTTG
TATAGATCGATCAAATGAAAACAGAAGAGGATGAACCAACTGATGAGGCC
AAGAAGTTGATGAGTGATCAGGGTAAACTTGTTGAAGAAGTTTTTGCACA
TGAGGACAAGGATAAAGATGGTCTCATTTCCTTTGAGGAATTTTCTGGTC
CTAAGCACGACGAACTTTAAAATGGATATTATTTTTTGTTAATTACAACG
CATTTTTTTGTTAAGTTCTTTTCTATTTAGAAAAACATGTAAACAAACCA
AAATCCCTAAGTAATCGTTATATTCAAACGCATTTTATATTTTAAAGAAA
ATCCTGTTAGTATAAAAACATCTCATTATTTATAAAATCCACCAAAAACA
CGCAGATTATTTGTTGGTGAAAGGTTTCAGAGTATTTTCATACGAATAAA
AGTATTTTTTTAAACTTTTCTCTCTGTGTTATCTTTCATTCCTATGCAAC
TCATCGTTTAATTAACTATTAATTGCAATCACTATAAGAAAGCTTGTGTA
CTAAGAATTAGGAAATGAAATGCATGGATCAGTGTTTATCTGAGAATAAT
AATAAGAATAGTATTCAAAGTTGCTTGAGGTATTACTTAAATACAAAGCA
TCGTAGTTTTTGGTTTTAAAGATACTTCATTCATGTCTTGAATAACATAC
CATTGTTAAATATAAAAGTGTTCTCTGTACATTGCACTGTCCTCTAATTT
ATGTCGTTGAAACTAAGGACTGCATAATGGATCAATTATGAGTTGTGAAC
TCTGGGTTCAAACTGACTAAGGCTATTTTTTCCTTAGTTCATACCTGCTA
ATTGCAATCGATTGTAACTCCTTAGTGTATAGGGATGCAACAGTTAGGGG
AGTAGGTTTTATAAATATACGATAATTTTTCACACGTAAAACCTCTTTTC
TTTTTCTGGGTGAAATATATAAGGATTTCTCATTCCTTGGTCCCCTAGTT
GTTGAAATGTGATTTTATCACAATAGCGGCGTGTGTGAGTGGTCAACGTG
CGTACATGAGTAAAAATTATACCTACTCCAGGTATACAAGACGAATTATT
AATATATCTACTACATTTCGGAAAAACATATAAACTTTGCAAGCTGCTCC
TGTTGATGTTTTATGAAGTTCGATTAAGTGATTTGTGTATTTTGAGTAAC
GACTAGGAATACCATGACAAAATGAGGATCGTGGTTACATGGAGTTTACT
TCTATTTACATTTGGAACGGCTTTCCATGCCGTATGTAGTAAGTTACTGA
GAGCTTGAACATTGTTATAAAGTCTGCAACCTATATAATATTCCTTTAGT
AGTCATTCATGGTTAATATAAATGAACATAATATTTTTGTTACTTTATTC
TAGTTGAAATTTGATCCCGACGAATTTTATTACAATTTTACTCATGTTGA
ATTAAATTAAAGAAATGAGTAAAGTTAATCAATTTATAGAAATATAATAA
TGATCATAAATTTTGAGATTAATTAATATTAAAAACAATACTATAACATT
CATAAATTAATGAAAACTTTAGCGTTTTTCTTTTGCACGTTCGCTTATTC
ATTTTTCACAAAACTAACTCTATTTATTAAATATTTTGGTTCAATTTTAG
GTTTAAGTGTAAATGAAATAAAAAGTGTCACTCATGATAAAGAACCATCA
GAGACAACTCAAGTTGTCACTCCCTCAACCACGACGGGTTCTCCAAAAAG
TCCTAATAAAAAGTTAAATACTAGAGTTTTTTCTGCTAGACATAGACTGA
GAAATGTTTTATTAGAAAAATATGATAAAGAAGTTCACCCGGTCTCAAAT
CATTCGGATACTGTGGTTGTGAGTGTGGGTATGTCCCTAATTCATCTTGA
TATTAACGAGCTTAAGTCTACAATGGATGTTGATGCATGGATGAGATTTA
CATGGATTGACGAATATCTTTCATGGGATCCAAGTGATTATGAGAATCTG
ACAAAGATTCACTTTTCCGAAGATGAAATATGGCAACCAGATATTTTGCC
TTATAATAAGTATATCATTAAAAGCTTTTAACTCAGATTTAAACTAAATG
ATATTTCAAATTTAGTGCGAATCCGGAATCCTTGAATCCTTATCATAAAA
CGAGTTTTTTGGTTCATCATACGGGAGATGTTCTTTGGGTTCCCCCCGTC
CATCTCAAGGCATTTTGTCGATTGGATTTAAAAATGTGGCCACTGGACAC
TCAAACTTGTAGTCTCAAATTTGGTTCTTGGACCTCACATGCTAATCAAA
TTGATTTAGCACTTTTTAAGAATGCTACAGTTGTTAGTAACTTTACTCAT
GATCTTGCTGAGTGTGTGTTCTTTTTTATTCACAAATTTATCATTTTTTT
CAGGTTGAAAAAATAGATTTTTATACAAAGGACAGAGAATGGGTTGTTTT
GAATACAACAGTAGTCAAAAATTCCGTCAGTTATGTCGAACATCCAGATA
TTTATGCGGATATAACTTTTTCCTTCAACATGAAACGCATATCGCAATCC
TACAAATACGTTATAATATTACCATGTCTAGGTAATGGTTTACCTCGATT
CCTTATAACTATTGGTCTTAACTATTGTATTTCCTCTTATTTAATATAAT
CCACAGTCACCATGTTGATGTCTACTTGCTCATTTGGACTACCTTCCAAT
TCACACGAAAAACTATTCTTAAATGGAATTGCATTCATTGTGTGTGTATT
ATATTTAGTATACTTTGCTACGATTTTACCATTTCAATCCTCAACAGTGC
CCATCCTAGGTTCGTACTTAGTTATGTAGTAATTCTTAAATTATATCTAA
TTTATCATTCAATCATTGATAGTGAAATTCTATAGCAATACTGTGGTTCT
GATTGGAGCAGCAATTGTTATTAACGTCATTGTCCTTAATATGACTCAAG
TTCGCAAACACGTGTATCCACCAAAATTTTTAAGAATAATATTCGCGGGG
CCTCTCGGAAAGTGTTTATGCCTAGACCATTMCCGCCATCAAGTAAATAT
TACCTAATTATACTTAATTAGGTATTCTATCTAATTGGATCATCTCTTTT
AGATTTCTTCAACACATACACGACTTCAGGTTAACAATGAGCTAATAGAC
ATGGCTGAAAGCGAMCAGCCTCCAGATCTTTCTCAGAGACGAACAATAAG
TTCTAATGATGGATTAACTCGAATAAACTCAATGGAAGAAGACGAAAATG
ATTATATTTTTTCGGGGAATGATATTATGGGTGAATGGATACTTGTGGCG
GCTGGGATTGAAAAAATATGTCTCTTCACTTATGCTCTATCCTTTTCCAT
AGTGACATATTCATACTCTTGA
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