EMLSAT00000006529, EMLSAT00000006529-702376 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006529
Unique NameEMLSAT00000006529-702376
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s357supercontigLSalAtl2s357:315785..319090 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006529 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006529EMLSAG00000006529-689295Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028543EMLSAE00000028543-737471Lepeophtheirus salmonisexon
EMLSAE00000028544EMLSAE00000028544-737472Lepeophtheirus salmonisexon
EMLSAE00000028545EMLSAE00000028545-737473Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776273auto776273Lepeophtheirus salmonispolypeptide
EMLSAP00000006529EMLSAP00000006529Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006529

>EMLSAP00000006529 ID=EMLSAP00000006529|Name=EMLSAP00000006529|organism=Lepeophtheirus salmonis|type=polypeptide|length=74bp
MLFQLAWLRSDSKAILAIHNHMVTNNPRMSVGHNDXGHNSWTLEIKNLQR
NDSGNYMCQINTEPMTSQRSSLQK
back to top

mRNA from alignment at LSalAtl2s357:315785..319090+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006529-702376 ID=EMLSAT00000006529-702376|Name=EMLSAT00000006529|organism=Lepeophtheirus salmonis|type=mRNA|length=3306bp|location=Sequence derived from alignment at LSalAtl2s357:315785..319090+ (Lepeophtheirus salmonis)
ATGTTGTTTCAGTTGGCATGGCTAAGATCCGATTCGAAGGCTATTTTAGC
CATACATAATCACATGGTAACAAATAATCCCCGAATGAGTGTTGGCCACA
ACGATGMCGGCCACAATAGTTGGACTTTGGAGATTAAAAATTTACAAAGG
AATGATTCTGGGAACTATATGTGTCAAATCAATACTGAGCCAATGACTAG
TCAGGTAAGACAAAAAATAGATTAAAATCATCTACGCAATTGAATTTGAA
ACAATGGAATATAATGTTAGAGAATATAATTTATATATTTTGTTTCACTC
GAGGATAATGGATACTATAATATAATTTGATAATATGAATTATTTTTTAT
GAACCGTGTCTATTGATTGTTTCAAATTTTATGGTGTGATTCCTCGACAC
AAGTACATACATAATGTATTTTATATGATATAGCCTGTATTAAATAGGAC
AGGTATCAATGTGTAGATACTAGGGCTGGGACGGTACTCTAAGCCCACGG
TTCGGTACGAACTGCGGTACACCCTTCATGGTATGCAGTTCAGTACGGTA
TTATAGTACAATACTTTTTTGTTTAATTAATGTAGTTTTTCAAGTTTCTT
TGATATTTTATTCTTAAAAAAAATTTATTTTCTGTACAAATAAATTATTC
TTCAATTTACTTAAATTATCTACAAAATAAAGGTTGATATAAAATATATG
TACACAAGTTATATTTGTGAAAAGCTTGTCTACATTCTCTGGTAATAAAT
AAGACCAATTAGTAGTCACACTATCGCCAGTGATCAAAAAAATTAATTTG
CTCGATACATATGTACTAGTAGTTGCGAAGTATCGTGAAGCTAATTTGGA
AGCATTTGGAAATTTAGTTAAATTATCTGTCCACCGTAACATTGAGTTTT
CGTCAACTGGGATGTATTTTATCATTTTGTAAGTAATTATTTCTTTTATG
TATTAAGAAATACATAAATTATTTCTGATACAAAAGGATCCTTATGGATT
ACATTCTTACCTCTCTGTTTAAATCTATTGATGGATAAAAAATAATCAAA
ATTATCTATGTAATACACGTACCGTACAGAGCGTAAAAATGTACCAAAAA
AAGCCTCGGTAAAACCCTGTATCTTAGCAGCCCTCGTTGATATCAGTGTT
GGATTGGTCTAAAAAAGCTGAAATGAGTACAATCCGGGCCTAATAAAATT
TGTGAGTCCTAGTACCGGTCCTTATAAGTCTTTATGATAACTACAACAGA
AATGACGAAATTACCAACGATATCCTTTCAGCTGTTCAACATAAACTCTT
TGAAAGAATAAGAATTGTGTGGCTAGAACTTATTATTATACGAGCTGTGT
TAAAAAAGTAGGGTCACTTTTCAAATTTCACGGGCAACGTACATTTGGTA
TGGTCTAAAAAAAATTGTACTGATAAAAAAAAACTTATAAGGAAATCTCA
ACTCTTGTAGACACTCGTATTTTCATTTTCAATGATCAGAAATTCAATAA
ATTCTTCTTCATAAAGATCAAAGCGTATTACGTACGTCGAAATTCATTCT
GGCTAGTGGTGTGTCAATCCTTATTCAGGACTGAATACTGTAGTCCCATT
CAGTTCGGACTTGGCCCGGTCCAGGTCAGACGGAAAAATAATAAACTTTG
GTCCTTGATGGCGTTACTAAAATTTTATTTATTCTTTTGTGATCAGTTTT
AGTACTGACGGTTTCAATGACCGGGCATATAACTGGACTGATCAATTAAA
TAAGGACTGACACATTAATAATTGTTGCTATTTGCCTTGGGACATGAGAT
AAATCAGCTTATATAAAAAAATGGGAAACAAATGCATACTGATTAAGCCT
TAGTGCTGCAAAAAATTTGGCTTATCACATAGCTTTTACGATGGTGGTCT
GAATAGTTTCCAACCTCAACATGAACATGGTAGCACTAGTAAATAAAAGT
TTGTCATATCTTAAGAGACTATAAGGGAAAGAGGCGTCATGTAAATCCAT
CAAGAATGTTTTTTTTGTATATGTGTTTTTTCATTTGTAGCGCAGTTCAT
TGGTATATCACTTCTTTCGACTAAGATTCAACTAATGTAATTTAATACAA
GTCAACGTTTCAGATAGGGTTATGTATTTTCTTTAGAATAAACCAGGAAC
ATAAACTATTAATAAAAACCAGGGTTCATAATATCTTAATCATAATTATG
ATCTATAAAATTATATAAATTATTTTGAACCAAATATACATAACCCATAT
TATCTACAAAGGGTATTTGTATTTTATATTTTTTGATCGAGGTTACGTGA
ATCATGAACATAATTGATATACATAGTCTTTCTTTACTTTTTATTTGAAC
CATCTTGTCTCCTCTTTTCTTCTTTATTCTCTTTAGTCACTTCTATCTAG
CATCTGTTGACAGTTACTCACGAAAGTTTCAGGCATTTTGAAAGGGCATT
TGTTATGTAACACTCGTTAGAGTGTGTTGATGTGAGTGTTTTTGTGAAAT
TGGACAAAATCGAGTATGTAGCTCTCATTAAATATTTGTTTTAGAAAGGA
TCACCTTTAAATAGATTCGAACAATAGCAGATATATAAAGGCCAACTCGG
AGTAATTGAGCCAAAAATATAAAGTGTATCATTATCAATTATTTTGCAGA
GAAAAACGCCGAGTACTATTTGAACGGGTTACAGAGATGGACACATCGTA
GGGAGAAATGTGGTGTAGCGTTACATGTTGAAAAATAAATATGAAAAAAT
AAGAAAAAAACGTATTGTATTTTTGTTAGGTAGGAAACTTTTCAGAATCC
TCTTGTATGTAGAAGTGATATTTGCAAAGATTAGAACAACCTGAACTTTT
GCACGAATTTCCTACCATAGTGAATAAATAGTAGCTTTAACCTTTTACAA
AATTATCAATTATTTTTTTTAAATTTGAAAAAATACAATTAATCAATAAA
AGTGCATTTATTTTTTATTATACAAAATGATTGTGGAATATTGAATAAAT
GGTTATTTATTGTACATAACACATGTATACATACATGAGAGACCATTGAA
GGAGATTCCTTAAATAGTTTAGTTATTGTTGTTTTTCTTTGAGAGAAAGG
GGATGAAATGTAATTCAAGAATCAAACAATAAAGTCCATTCTTCTTTATG
CATTAAAGAGAAAGAGAGACAAACACAGACATTTATAGCCTTCCCTCATT
ATTATTATCCCAGAACAAAATACCGAGTGGTCCATTAGGTTATGAACACT
TTGAATATTAAACTACAAAAAAATATAATTTATTAATATAATTTCAGCAA
AAATAA
back to top
Add to Basket