EMLSAT00000006534, EMLSAT00000006534-702381 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006534
Unique NameEMLSAT00000006534-702381
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s358supercontigLSalAtl2s358:179628..181232 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006534 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006534EMLSAG00000006534-689300Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028598EMLSAE00000028598-737526Lepeophtheirus salmonisexon
EMLSAE00000028599EMLSAE00000028599-737527Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773980auto773980Lepeophtheirus salmonispolypeptide
EMLSAP00000006534EMLSAP00000006534Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006534

>EMLSAP00000006534 ID=EMLSAP00000006534|Name=EMLSAP00000006534|organism=Lepeophtheirus salmonis|type=polypeptide|length=514bp
MLQQKIYDDSSPLGGGGYGSAGGGISTGPSAYPGPFSSPQQQDMSSHCYG
SGLSPPLGCGSMNTAAAXXAAAAVAASAEPTYFHPEVNGAPPPSGSPSSS
SSNNNTNRSHGVGATPNNSNNNNNSSSSNSSSSSSATAAKNYRRSYTHAK
PPYSYISLITMAIQNSTSKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRH
SLSFNDCFVKVPRTPDKPGKGSFWSLHPNSGNMFENGCYLRRQKRFKCPK
KDDRIPLKKDSLGRGGGNGKQQGQQGHQQRHEIETKKESPSSMMNNPHSH
HHQDYLHHPHHPHSHHRDYKEDNKSNAAQQLSSHGQNQVHHHHHFSGGGN
GGKLNSGDNNSGEDGIPHHHHHHLVLPVATPQQGHGSSKYEPLHHGEGSA
ALHHGGDGRYIIPPPLPSDMNNAGGLMMGGGLIGAVGKGDPHSMSFTGSA
VSSNPFSINRFLPEHKVESHHYDYAANGFSAASSIPSAENMYYPPSLYPV
HHPHPVSSSVQSNI
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mRNA from alignment at LSalAtl2s358:179628..181232-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006534-702381 ID=EMLSAT00000006534-702381|Name=EMLSAT00000006534|organism=Lepeophtheirus salmonis|type=mRNA|length=1605bp|location=Sequence derived from alignment at LSalAtl2s358:179628..181232- (Lepeophtheirus salmonis)
ATGCTTCAGCAGAAGATTTACGATGACTCTTCTCCTCTGGGAGGCGGAGG CTATGGTTCCGCAGGTGGCGGAATTTCCACTGGTCCTTCTGCCTATCCAG GCCCCTTTTCCTCMCCTCAACAGCAGGACATGTCTAGCCATTGCTATGGC TCCGGACTTTCACCTCCACTTGGCTGTGGATCTATGAACACTGCCGCGGC GGKAGSAGCCGCMGCTGCCGTTGCTGCGTCTGCAGAGCCTACTTACTTCC ACCCCGAAGTGAATGGTGCACCCCCTCCAAGCGGATCTCCTTCTTCCTCC TCTTCCAACAACAACACGAATCGCTCTCATGGTGTTGGTGCCACTCCCAA TAACAGCAACAACAACAATAATTCATCCTCTTCGAATTCCTCCTCTTCTT CCTCGGCGACAGCAGCCAAAAACTATCGGAGAAGCTATACCCATGCCAAA CCTCCCTATTCCTACATTAGCCTAATTACGATGGCGATTCAGAATTCAAC GTCCAAGATGTTAACCCTATCGGAGATTTACCAATTCATTATGGACTTAT TTCCCTTCTATCGGCAGAACCAGCAGCGGTGGCAAAACTCCATTCGACAC TCCCTCTCCTTTAATGATTGCTTCGTCAAAGTACCTCGAACTCCGGATAA ACCCGGAAAGGGATCCTTTTGGTCACTTCATCCCAACTCTGGAAACATGT TTGAGAACGGCTGTTATCTAAGGAGACAAAAACGCTTCAAATGTCCCAAG AAGGATGATCGCATCCCTCTGAAAAAGGACTCCCTCGGTCGTGGAGGGGG CAATGGGAAGCAGCAAGGACAGCAGGGGCACCAACAGCGTCATGAAATTG AAACGAAGAAAGAATCTCCTTCTTCCATGATGAATAATCCACATTCACAC CACCACCAAGACTATTTACATCATCCCCATCACCCACATTCTCACCATAG AGACTATAGTGCAGCTGCTGCGGCTGSGGCTGSAGCAGCGGKGAGKATGC ATAATCACAGCCCTTCAGAAGAGGACAATAAGAGCAATGCAGCCCAACAA CTCAGTTCTCATGGTCAAAACCAAGTTCATCATCACCATCACTTTAGCGG CGGAGGAAACGGGGGTAAGTTGAACAGTGGAGATAACAACTCAGGGGAGG ACGGAATTCCCCATCACCACCATCATCACCTCGTTCTCCCAGTCGCCACA CCTCAACAAGGGCATGGCTCCTCCAAATATGAGCCCCTTCATCATGGGGA AGGGTCTGCTGCTCTTCATCATGGTGGAGATGGACGCTACATTATTCCTC CACCCTTACCCTCAGACATGAACAATGCTGGTGGTCTCATGATGGGTGGA GGTCTCATCGGGGCTGTCGGAAAAGGGGATCCTCACTCCATGTCTTTCAC AGGCAGTGCCGTCTCTTCTAATCCCTTCTCCATCAATCGCTTTCTTCCAG AGCACAAGGTAGAGTCACAYCACTACGATTATGCGGCTAATGGATTCTCC GCAGCTTCCTCTATACCTTCTGCTGAGAACATGTACTATCCACCAAGTCT ATATCCCGTGCATCACCCTCATCCCGTCTCTAGCTCTGTTCAGTCCAACA TCTGA
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