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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s358 | supercontig | LSalAtl2s358:240364..245328 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006538 >EMLSAP00000006538 ID=EMLSAP00000006538|Name=EMLSAP00000006538|organism=Lepeophtheirus salmonis|type=polypeptide|length=1011bp
MMMKNLMWICVSLFLASIPLSHSAAVMSVDLGSEWFKVAVVSPGVPMEIA
LNVESKRKTATTVSFRDGERAFGSEALQNCVKYPKTCYVYFIDLLAKSID
HPVVQNFKEKFPYYDLEEDPSTGGVRFKHAENEYYTPEELLSMILTHARS
IAESYTGQKIKDAVYTVPVFFNEAERRSVLRASKMANLDCLQLISESIAV
ALNYGMFRRKEINSTAKNLILFDMGAQDTTVSVVAFQMMKTKERGFSETH
PMAQILGVAYDRDLGGLDLQLKLRDLLGQKFNDLKKSKNDVRKNPRAMGK
LFKEAGRVKNVLSANSKLYAQVENVMEDIDLKVPISREEFYELIPDFFYR
SLRVFDDALKNAGGMKMEEISEVILVGAGTRIPKLQEVLAERVGFELSKN
LNTDEAAAMGAVYKAADLSNGFKVKKFITKESVIFPXDVDFKRHFVDDDD
KPQVKQVRRSLFGRSNNYPQKKIMTFNKFSDDFVFNVNLNDVAYLGEIEV
SRIGGFNLTEVTVKGVKSALENNTGENIESKGVKAHFILNESGFITVSAI
EAVFEQTISVEEQEAEEKNKLKESGAGGSKNDSDTEASDTWSKIGDTFSS
LFGEKSKAEEKDEESSGDKKDDSIKEENGGSKKNGTKKEKVKEPKKPKIV
IIKEPLEFEVVILNGAHPSEEAVNESIAKLRALDKKDDEKRERENAQNTL
ESFVIDMKDKLYQELYEKSSTEEEREKISNKLSEVSDWIDEEVGPYTETK
LMQSKLTELHELTSSLFARVREHTERPEAFEVLRSMVNSSQFFLGKARNS
AHWFKDNELDNFEKKISETLEWRDHVEKELSEQPMHEMPKTTVFMIAEKA
SEXDREVKYLVNKAKIAKAAEEKEKLMKEAEELKIKADELKKKKKKKSKK
THENVAEPEEGSGDVDKSDDVKAETYQPDKETKTDEDVKETENEGKKVLE
DIQIEPEEENKDDVDIEPEEENKEDIDIELEEENEDEESSEKETVKKEKP
SSGEPKEKEEL back to topmRNA from alignment at LSalAtl2s358:240364..245328+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006538-702385 ID=EMLSAT00000006538-702385|Name=EMLSAT00000006538|organism=Lepeophtheirus salmonis|type=mRNA|length=4965bp|location=Sequence derived from alignment at LSalAtl2s358:240364..245328+ (Lepeophtheirus salmonis)
CGTCAAAGCATTTATTTGATTTAAAAGACTTATATTGGCCCCAATATGCC
CTTTCTCATTATTTTACTACGACGACCAATTTTGGTTTCTTTAAGTGGAA
ATTTCACAAGAGTCTTCCAAAGAGTTAATACGAATAATTTGTTGATAGAA
TGTAATCCATTCTCAATGTTGAGAAGAATCCCCCTAGATTATTTTAGTGT
TAGCGGGCCACATATGAAAAAGGTGGAGGGGAATAATGAACCAATCAGAG
ATCGCCAAGTGAAGAATGTGCTTATGATGACGTCATCTCAAATTGACAGT
CTGTTCCTATAACTTTTCCTGTCTCGGCTCTCTCTGTCTCTCAGTTTGTG
TTTCCATCTTCCATCTTTTACTACTAGTCTACTACTATAGCTCCACCGGC
ATACTTTCTACTAATAATTACTTAGTAATTACAGTGCTTATGTTTTAAGA
ATTCCTTCTAATAAGGATTATTCTTGTTGTAGAGTTGGTCATCGTTTAGT
TGAGGAATTCTTGAGTCGGCAGACGCTATGATGATGAAGAATCTGATGTG
GATATGTGTGTCGCTTTTCTTGGCCTCTATTCCACTTTCCCATTCTGCCG
CTGTAATGAGCGTTGATTTGGGAAGTGAATGGTTTAAGGTGGCGGTCGTT
TCCGTAAGTTTTCTTTAGGGCTTAGTATTGAAATATGATGATTGTAATGC
TTTATGCCTGTATTTACTAGCCTGGTGTCCCAATGGAAATCGCGTTAAAT
GTGGAATCCAAGAGAAAGACGGCAACTACCGTGAGTTTTCGTGACGGTGA
AAGAGCTTTCGGCTCTGAAGCTCTCCAAAATTGTGTGAAATATCCCAAGA
CATGCTACGTGTATTTCATAGATCTATTGGCAAAATCCATAGACCATCCT
GTTGTTCAAAATTTTAAGGAAAAATTCCCTTACTATGATCTTGAAGAGGA
TCCTTCTACGGGAGGCGTCCGATTTAAACATGCAGAAAATGAATATTATA
CACCCGAGGAACTACTGTCCATGATTCTCACCCATGCCAGAAGTATTGCT
GAATCTTATACGGGTCAAAAAATTAAAGATGCCGTTTACACTGTACCCGT
TTTTTTTAATGAAGCTGAAAGGAGATCTGTTCTCAGAGCCTCAAAAATGG
CCAATTTGGATTGCCTTCAGTTAATAAGCGAATCTATAGCTGTGGCTCTC
AACTATGGAATGTTCCGTAGAAAGGAGATTAATTCTACAGCAAAAAATTT
GATATTATTTGATATGGGTGCACAGGATACGACTGTTTCTGTCGTAGCCT
TCCAAATGATGAAAACAAAAGAGAGAGGATTCTCTGAGACTCATCCCATG
GCTCAAATTCTTGGCGTAGCTTATGATAGAGATTTAGGTGGCTTGGATCT
CCAATTAAAGCTACGAGATCTCTTAGGTCAGAAATTTAATGATTTGAAAA
AGAGTAAAAATGATGTTCGAAAAAATCCTAGGGCCATGGGAAAGCTTTTT
AAAGAAGCTGGACGTGTAAAAAATGTGCTAAGTGCCAACTCCAAATTATA
TGCTCAAGTTGAAAATGTCATGGAAGACATTGACTTAAAAGTTCCTATTT
CCAGAGAAGAGTTCTATGAATTAATTCCTGATTTTTTTTATCGCTCCTTG
AGAGTTTTTGATGACGCTCTTAAAAATGCTGGTGGTATGAAAATGGAAGA
GATCTCTGAGGTTATTTTAGTTGGAGCTGGTACTCGTATTCCTAAATTAC
AAGAAGTTTTAGCTGAAAGAGTTGGATTCGAACTCAGCAAGAATTTAAAT
ACGGATGAAGCTGCTGCTATGGGTGCAGTTTATAAGGCTGCAGATCTATC
AAATGGGTTCAAGGTAAAAAAGTTTATCACGAAGGAATCGGTTATTTTCC
CAAMCGATGTTGATTTCAAGAGACACTTTGTGGATGATGACGATAAGCCC
CAAGTCAAACAGGTCAGAAGATCTCTTTTCGGAAGGAGCAACAATTATCC
ACAAAAGAAAATAATGACATTTAACAAATTCTCTGATGATTTTGTATTTA
ATGTCAACTTGAACGATGTTGCTTATCTTGGGGAAATTGAAGTCAGGTAA
AACTATATATTTGATGGTTTTTATTTTAATATATATTTATGTTTTAAATA
CTTTTTCAGTCGAATTGGGGGATTTAACTTAACCGAAGTGACTGTGAAGG
GTGTTAAATCAGCATTGGAAAATAATACAGGAGAAAATATTGAAAGTAAA
GGTGTAAAGGCCCATTTTATATTGAATGAATCTGGCTTCATTACTGTCTC
GGCTATCGAAGCTGTGTTTGAACAAACTATTTCAGTTGAAGAGCAAGAAG
CTGAAGAGAAAAATAAACTAAAGGAATCTGGTGCTGGTGGCTCGAAAAAT
GACAGTGACACTGAAGCCAGTGATACATGGTCAAAAATAGGTGACACTTT
TTCCAGTCTTTTTGGAGGTAATTTTTTTTTTTTGTTGTTGCAGAACAAAT
AATAGTTATAAATTTATACGTACTCATTTATAGAAAAATCTAAAGCGGAA
GAAAAAGATGAAGAATCTTCTGGAGATAAGAAAGATGACTCCATAAAGGA
GGAAAATGGAGGGAGTAAGAAAAACGGAACTAAAAAGGAGAAGGTCAAAG
AACCTAAGAAACCCAAAATTGTTATTATCAAAGAGCCACTAGAGTTTGAA
GTTGTTATATTAAATGGAGCTCATCCTTCAGAAGAGGCTGTCAATGAATC
AATCGCTAAGCTTAGAGCACTAGATAAAAAAGATGACGAAAAGAGAGAGC
GTGAAAATGCWCAAAATACACTTGAGTCCTTCGTTATTGATATGAAAGAC
AAATTATATCAAGAACTATACGAAAAGTCCAGTACAGAGGAGGAAAGAGA
AAAGATTTCCAATAAATTGTCGGAAGTCTCAGATTGGATCGATGAAGAAG
TTGGACCCTACACCGAAACAAAATTAATGCAGTCAAAGTTGACGGAACTA
CATGAGCTTACGTCAAGCTTATTTGCTAGAGTTCGTGAACATACTGAAAG
GCCAGAAGCATTTGAAGTGTTGAGGAGTATGGTCAACTCAAGTCAGTTTT
TCCTCGGCAAAGCTCGTAATTCTGCACATTGGTTTAAAGACAATGAACTG
GATAACTTTGAAAAGAAAATCAGTGAAACTTTGGAATGGAGGGACCATGT
TGAGAAGGAATTAAGTGAGCAACCTATGCACGAGATGCCCAAAACGACAG
TATTTATGATTGCCGAAAAAGCATCAGAACWGGATAGAGAAGTAAGTAAT
AAAAAAATATATAAAATTAAATATTGGCAAAACTATTTTTTTAAATAAAA
GGTGAAATATTTGGTGAATAAAGCTAAAATTGCCAAAGCTGCTGAGGAAA
AAGAGAAACTAATGAAGGAAGCAGAAGAACTTAAGATTAAAGCCGATGAG
CTTAAGAAGAAGAAAAAAAAGAAGAGCAAAAAAACCCATGAAAATGTTGC
TGAGCCAGAAGAGGGATCAGGTAAATTAATTTAAAAGCAAAATATAGATT
TATTTTACTTTTGTCTTCAATCAGAGGATTACATAGAGCTTGTTCCTGAC
CTTGTTTGGATTAAGTCCAAGGGTTCAATTAGTGAAAATCTTCCCTCTAC
TGAATCCTCCKCCTCTATCATACCCGACAATCAGCCCTCTCCCTTGTGGA
CTGCAATTATTGTTTTAGTCCTTCATATTTTATTCGAGTTTTTTAAATAA
GTGATAGTTTGTTATACCCCAAAGTTGCCCCATCAATTCTTGAGGTATGT
GTTCATTTTTAAATGAGGCATGGGTGGGTTGTTGGACTTAAAAATTAATA
AAGTTTCATTTTTCCTAACTTTAAAAGGATATATATTTATTAAAAAAAAA
CACMCATCTGTACGATATGTATAACATTATTGATCATAAATTTTGGACAA
CAAATTGATATCTATTATACTTCAGGTGTCTACTATGTACACTTAACCTT
TATTTTTCTTTCTTTTTATTCCGTATAGTATATTTTTATGAGTTATAATA
TTTAATAATGACTTACTTTTATAAATGAATGTTTATAGGTGATGTTGATA
AGTCGGATGACGTAAAAGCTGAGACATATCAACCTGACAAAGAAACTAAA
ACGGATGAAGATGTAAAAGAAACTGAAAATGAGGGAAAAAAAGTTCTGGA
GGATATACAAATCGAACCTGAGGAGGAAAATAAGGATGATGTAGACATCG
AACCTGAGGAGGAAAATAAGGAGGATATAGACATCGAACTTGAGGAGGAA
AATGAGGATGAGGAATCAAGTGAAAAGGAAACTGTCAAAAAAGAAAAGCC
TTCTAGTGGTGAGCCAAAGGAAAAGGAAGAGTTGTGATCTTCTCATGATC
AACTTTTGCCCCTTTGCTTTTCTCTCATGAACTATATTCTTATCCAATGT
GTGATAGACTTTAATAAAAAAATTCTAGTGAAACCAATTTTTTATTTATC
TATAAATTTTTAACACAAATAATAAAAAATGCGTGACAATTATTTCATGT
TGAAAACTCAAAATCTTCTACTTATTATTACACGTCACAAGTTAGGTATT
ATAGTCGCTTCAATTGGAGCACAATTCATACTTTTTTTTTTTCATTTTAA
GTTTTATTTGTCTTTTAGTGATGCAATGTTTATATAAATCCCATTACCTA
TTCATTATATGAACCGCGTCAAAATGATCATTAATTTTTTAAATCTATTT
TCGTGCATTCATTTCGTCAAGGAATAAATGCACACTATTAAATTATGTCT
TAAATGTTAACCAAAATAAATATCCTTTCTGATGAAACAAAAAAAATTCA
AAAATATACTAGTTTTACACAAATAAATACTTTCGCAGAGTTTTAATTGA
AATAAACAGTGTTAATAGTTGCTCTAAAAATATGTTACATAAAGCATTTA
AACCCATTTACATAA back to top
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