EMLSAT00000006542, EMLSAT00000006542-702389 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006542
Unique NameEMLSAT00000006542-702389
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s358supercontigLSalAtl2s358:70384..73564 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006542 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006542EMLSAG00000006542-689308Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028630EMLSAE00000028630-737558Lepeophtheirus salmonisexon
EMLSAE00000028631EMLSAE00000028631-737559Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771324auto771324Lepeophtheirus salmonispolypeptide
EMLSAP00000006542EMLSAP00000006542Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006542

>EMLSAP00000006542 ID=EMLSAP00000006542|Name=EMLSAP00000006542|organism=Lepeophtheirus salmonis|type=polypeptide|length=117bp
MNFIARQTRLLAPENCRIPDVREVSPLLIRIRHFLLGRNNSNALRFQQGL
AERPGPPAHXPEGPHHKISSNHYFARDARREVKKPRDLGLPALGDGSAAL
DKRVKSVTPGRYYNYSD
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mRNA from alignment at LSalAtl2s358:70384..73564-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006542-702389 ID=EMLSAT00000006542-702389|Name=EMLSAT00000006542|organism=Lepeophtheirus salmonis|type=mRNA|length=3181bp|location=Sequence derived from alignment at LSalAtl2s358:70384..73564- (Lepeophtheirus salmonis)
ATGAACTTCATTGCGCGGCAAACAAGATTGTTAGCACCTGAAAATTGTAA
AAGAACCACGTATATTTCCATTAATATAAATGTAGATTTTGTTTGACGTC
AAAGAAAAATAAATCATGTGACGTAAAAAAGTACTCGATTACATACTTCA
CTACTCCTAATTCTTTTCTTTTGTATATGAATTAATTACCTACCAGGAAT
ATTGGAATTTACTTACTTTGAGCAATGACAGAGNATCATCCATAGATACT
GAATTTGACCAATAGCTGAGTTACTCATGTTGTATTTTAAATAATATTGA
TTCCTCGTTTCTTCATTATTTACTAATTACTAATTAGAAGTGCTCCAGTA
CAAAGTACTATTTTTTATTTCCATATTTATTCTCAGCTGTTTCTTATTGC
GCAGTTATTTATTATTGTTTATTTCCTGAACTCAAATGAATTAGGGAAGA
CAGTATAAGTTATCACACTTTTATATTTTAAATCATAATAGACATAGTTA
TGGCCTTAATGGATCGGTGTTCAATGAACTGAAATGATAGTTTTATGTCT
TATTTAAAAATAATACGTTATAATTTTTTATGCATCTTAATCATGGACTA
TTATTTTTAAATTTCATATTTTGTACTCTAAATGTGGTAGTTAATATTGA
ATGTCTATTAACTGTGATTTGTTTGACTTTGGATTTAATTATTTATGTTA
AAATTGTTTGTTCATTAGGATTTATCTATTTACAGACTAATATTTTTTCT
TTTTTTTTCATCATTTTAAGATTTGGAAAAATTATTCCAATTTATAGAAG
TCAATCGTAATGTAATATCAATTTGAAGGTTTTAGGACACTTAACCGAAA
GCTGCCTTCCCAAAGACGGACCCTACTGAAAATAATAATAAATATATTTG
ATGATGGTTCATGCTGCAATACTATTTAATCATTCATATTACTCCAATTT
AAAAAAATAAATGTTCAATTATTTGCCACGAATGACAATAATTAAGTGTT
CATTAATTAATAATTGATTTATTTCATTATATGAGGATGCTCCAACATTT
GGTTCGAACCACTATTAGAACCGTTCTAACAAAAATTATGAGATTTTTGA
CTCAATTTGGACTCGAATCCATATTTTGTAGACTTGCAATTCTACTTGAT
CTAACAATAAGTATCAAATACTCGAGACTTGACTTGGGTTCAAATTATAA
CAGTCGACTTGGATTCCAAAAGTTAAGACATAATTAGAATTTAAAAGCTA
ACACTACAAACTTTATTGAGTTTCAGACGATTATTTAATAAATTTTCTCA
GAATCCTTTCAATTTTTTCGAAGAGATACATATAAACAAAGTACTTTTCA
TAGTATCTTATCAATTGGAATTATAAATACGGATATATATATTTTCAACG
GGAAAATTATCTCACTCTTATTTCAATTTTGTTGTGGACATAAAGTACTA
TTCAATATATCTATTATAAGGAGAAAAATTCAAGTCATAGTTTTTACACT
TGGACTCAAATTAATGCTATATATACATATTAGAATGATCAATCGTTCTC
TTTGTAAATCCCTAATTATTATCATCTCGTCCTCATACTTCTTTCAAGTC
TATAATTATCCCATAGTTCTAAGCCTTTGCTTGAGTTTAGCCGTAGAATT
ATATTGTCTGGAATTTTATGATTCAGTATATAGTCCGGGGACTTTTTTAT
CAACTCATGAAATTTATATTTATTTTGTTTGACTAACAGTTAAATATCGG
TTTTTAAAAAATAAAGAAAGGAAGACCAAAAAAACTAGATCCAAGATAAA
AAGAATTAAAATTTAATAATATTTTGTTCTTAAATCTTCGAATCCGGGCA
CATGTTCTCTTTTTTGGAAATCAACCCCTAATATAYGAAGAATTAAAAAA
AATAATCAAGTCNCAAGTCAATTCAGTCTACTCAACCCCCCCCCKCCCCC
CCKAACAATGAAGNTTGATTTTTGTCCATGATTAATTATTTATTAAAACT
AATTCATGAATCCAAACCATGGAACTCTGGACGCTCTATAACTCCATGAC
TAAACTCAAGAAAAGCCTAAAAATGCATTAGTTATAGACTTGAAACTAAC
TCGAATGAAATTAGAGGATTAGATGACCAAATTTAAGTACTTCAACAATG
ACAAAGACTTGGACTTTTGAGAAAGACTTAAGACTCTAATTGGACTTGTA
GTATAAGGATATTTTCACAGCTTTCAATATTATATAATATGTATTCTACA
AATATTCTGTGCACCAATCATAATTTGCAAATAATGCAATGGCAGTAACT
TTAATGAAAAAATAATTCGACATAATGAAAGATTAGGAATTTACTTGGTT
GTTACAAAATAACATATACATTAATCTGTTAATTTCAAGATGACTTATTT
TTCCTTGATAACAAAGTAATGAATCACGGAATTGGTGTGCAAAATATTGT
ATAAATAATTATAATCTAGGTACTAAGAAGTATAAAATCTTTTAAATTTT
ACAAAAGTTTTACTATGTGGGATTTATGACAACCTCTGCCGTTGCCTTCC
CTATTAAATTTACTCAGAGCTATGAGAACAGCTACCTACGGCAGTGCTAG
AAACCTTTAAGTTTTGTAGAGGAAAGATGATTTGGATTGAAAAGCTGGAC
ACAGCTGACATATTATAAAGAACTTAAAGTAGTTGCTAGCTATCTCGACT
AATAGAGTAACATTGCAAATTATTGCMGCTGKCGTTAGCCATTCTGCTTT
GCAATTGTACCATCGTCCATCAGAGGAAGGTAGGATACGACGCCTGACGM
ACTGGAAAAAGAGAGAAAGGTGGGCAGCTGTTTGAAGTGTTAGCCATTAG
TCTTAGGYTGAAACCTCCTCCAGGTCGAATCCCCGACGTGCGAGAGGTGT
CGCCTCTTCTCATCCGCATCCGGCACTTTCTCCTTGGGAGAAATAACAGT
AATGCTCTCCGCTTTCAGCAGGGTTTAGCAGAACGTCCTGGACCCCCTGC
TCATKTCCCAGAGGGACCTCATCATAAGATCAGCTCCAATCATTACTTTG
CACGTGATGCTAGGCGAGAGGTTAAGAAGCCAAGGGACTTGGGCCTTCCA
GCTCTTGGGGATGGCTCTGCAGCCTTAGACAAAAGAGTCAAGTCCGTTAC
ACCTGGAAGATATTATAACTATTCCGACTGA
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