EMLSAT00000006572, EMLSAT00000006572-702419 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006572
Unique NameEMLSAT00000006572-702419
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s35supercontigLSalAtl2s35:912670..916438 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006572 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006572EMLSAG00000006572-689338Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028764EMLSAE00000028764-737692Lepeophtheirus salmonisexon
EMLSAE00000028765EMLSAE00000028765-737693Lepeophtheirus salmonisexon
EMLSAE00000028766EMLSAE00000028766-737694Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780058auto780058Lepeophtheirus salmonispolypeptide
EMLSAP00000006572EMLSAP00000006572Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006572

>EMLSAP00000006572 ID=EMLSAP00000006572|Name=EMLSAP00000006572|organism=Lepeophtheirus salmonis|type=polypeptide|length=90bp
MICLPTNNSDYSSPNYWESRYCQEKDEDYEWLGNYEAFRGVLTPGLNPLE
NAILILGCGNSTLGXXXXXXFRDVTSIDIAGSVIQRQSEK
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mRNA from alignment at LSalAtl2s35:912670..916438+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006572-702419 ID=EMLSAT00000006572-702419|Name=EMLSAT00000006572|organism=Lepeophtheirus salmonis|type=mRNA|length=3769bp|location=Sequence derived from alignment at LSalAtl2s35:912670..916438+ (Lepeophtheirus salmonis)
GGTTAATAAAATGTGTCACATGGAATAATCAAGAGTCAATGCAGCTCCAA
AAAGGATACATTCGCATTCGTTTTTTTAAGTACTGATAATGATTTGTCTC
CCTACTAATAATTCTGATTACAGTAGTCCCAACTACTGGGAATCCCGTTA
CTGTCAAGAGAAAGACGAAGATTACGAATGGCTTGGTAATTATGAGGCTT
TTCGTGGAGTCCTTACACCCGGACTTAATCCTCTAGAAAACGCCATTCTA
ATATTGGGCTGTGGTAATAGTACCCTTGGNNNNNNNNNNNNNNNNNNNTT
CAGAGATGTTACTTCAATTGACATTGCTGGGAGTGTTATTCAAAGGCAGT
CTGAAAAGTATAAGGGTATTTTTTATTAATGATTTCAATTTATGTACAGT
ATTTGATTTCTTTTCTCCACATTCCATTTATCATGTGCTATTTAATATCC
TATTTACTTAAATCGTTTGATTACAAATTCTTTCATATTTGCAGATAATA
CTTATTTGAAATGGAAAGTAATGGACATATCAAACCTCTCATCATTTGAT
GACGAATCCTTAGATGTCGTGATTGAAAAAGCGACCGTTGATGCTTTAAT
TGCATCTGAAAAATCCCCTTGGTGCTTGTCCAACGAAACATAGACTCTCA
TACATCGAACTTGTAAAGAAACGAGTCGAGTTTTGAAAAACGGTGGTCAG
TTCCTTTCTATAACATTTTCGCAACCTCATTTTAGAGTTCCTCTCTACGG
CAAGAATGAGTACAACTGGGGACTCAGTTACTATAAAATTCAAGGGAAAG
AATCATCTTTGGATTATTATTTTTATCGAATGATTAAAGGGAAACACCTC
CAGGAAGACGTAAGAGAAGATTCTTCATCTTCAATATCCATCTATTGTAA
GCAAGGAACATCTGGTATTTCGAACTTAAAGATATCTGATGAAGAAGTGA
TAATGTCCAGTAGTGACGAGGAAGAGGGTTTTGTAGGGAAGTTTAATATG
GATGATGATTGAAGACAATGAACAAATTGCATGAATACTAAATTCGATAG
TTTCAATATGGTATTTAGTTTTAAACTATGAAAGTTTATTTTTTTAGATG
TAATTATTAAGCTTTTGCTTCGTAGCATTACCGTATCTTTCAGAATCGTA
TGCTTTTGATTAAAAATAGTCAGTATTCCTAATTGGAGAGATCTTATTTA
AATTGTCGTCTGAGCCTCCTCTCTTACTAAATTATCAGATACTATTTCTT
ATTTTACCTTAAGATAAATTTTTAATAATAATTGAATTCTTATAAAGTAT
CAAAGGGATTTGTGACTACTCCTATAGAATTTAAAATGTTTGTTTTTTCT
AATAAAAATGTTCTGACTTACTAAAGGCATGTAATTATTATATCGTCAGA
GCATATTTTAATTGGAATATGAGAAATTGATGGTATTATACTTTTAAATA
TTAATAGAATGTATTTTGCTTTACTTTTAGTTTAGATAATGCTACGTTTC
TTTTTTTTTTAAATTATACTATATTCTACTATTAATTAAACTTGATGTTT
GATAGCAAAAGATAACGATTGTAACTTATAAAACTAAGTTGAACTAGACT
AATTACTATATGAGCATTACTTATTTGTATCTCTATAAACGGGTAGACTC
CCATTAAAACTAAAATTACAGATATATTTATTAAAAAATTAATAAATAAT
CAACTATAAATACTTAATATCTTACATAGTATTCATATAATTTATGTGTG
TGTATATATGATGAACGTCCCCCTTAGAAAAACAATGATAAACACCCATT
TATTTAAAAACTGAGACAGATACAGACTTTAGACATAAAATAAAAGTTGT
CCAGAATTAATTTAATTCTGATCAGACGAGATTCATGGGCTCTGGAGGGT
AAATTTGATTTTTCGCTAATAAGTTGATTTTTTTCATTAAATAAGATCAA
TTCCCCGTGTCTCAAAGATTTTTTTAGATATGGGTTGATGATTCGAAAAT
GCTCCAAAAAATTAAAAATCCCTAAATCGAATTATTGTACTAACAGAACG
TATATTAAATACTAATAAAAAAGGGAATTCGGAGGACGATGAGCTAGTTA
ATCATAGTATTTATTTTCAATCTTCATTATAATTATGGTTAAAGAAGGGG
CATGGCAAGTTAGCAATGACAATGACACAGGGTCAAACATTGAAAAAATT
ACTTTATATTTACCAAAATCAGTATTTTCACTCAGTCAATTATATGTTGA
ATTTTCAAGAGTGTGTAAAGGGGTTTAGGTTTGATTATGTTTACATCAAA
TCAATAGAAACAACAAATTATTTGTATTCAATGAGGTTTTGTAATTCTTT
CAATGGATAATATATTATTATCAAATATCATTTAGCAAAATCAAATCTTA
AAATTGTATTTATTCGATTTAAATTTATTTTACTTTTTTAATTTTTCATT
GGCTATCTTTAAGATAGCGTGTTCGTGATAGTGTTGCATTAATATTTTAT
GAGATAAAAATGTATTAAACTTTCACTTTGTTGGCATCACATTAATGTGA
AAATAGTAAAATAAGGATGGAAAAAACAATCGTAAACTTATTCTTACAGA
CTTAAATTCGTTAACATTTATAAAGTATTGCAAATTGGGACGATTCCCTT
AAAATATTAATCTGTTTAAGGCAATATCGCAGTTATTAGTATGCTAAAAA
ATTTAAATTTATTTTTTTCGACGTTCATTTTTAATGTTTTGTATATTTAA
AAAAAATCATTAAAGTACTAATAATCCATTATGGGACTAAGGAATACAAT
AGGATCTTATGAATTGATAGAAGCTAATCTATGCATCATTTTTGATGTAT
TAATAATTTCAAGAGACATAGCTTACGCACTATCTCAATCCTCCAATCGA
ATTTTATTCTCTACTTATTGCACAAAAATTATATTATTTAATAACAAGAT
TACAAAGACTAGTGATGGGAGAGTTTCAAAAAATATTTGATAAATTTTGA
TAAAATAAAACATTGAGATAAGTTTGTTATTTTTCGAAAAAATTAATACT
TTTCCCCTCAAAAATGCTTAAATATTTAGAAAAAAGAACATTGATAGATG
TGAGTATACATTTTTAGTATCGCCGTCTGCGCACTTTTTCTCTATATATT
CATTGTACTGGGAAATTAGGAAACTTAAATAGTCAAATAAAAACAAAATT
AATTTAAAAATAATCTTTTGTTTAATATCTTTTTCGTCATTCAATTGTGT
GTTTCATTTATAAATTTATCCAAAAACTACCTAAAATCATCAACAATGGT
AATTTGGAAGATCTTTTAGGCCCATGAGACAGGGCCTGTTTTAATCCCTC
AAAAAATGATAACATAAACATCAAAATTCAAGGAAGTATATTCTTTAATA
GGTCTTTAGTACACTTGCGCACTTGCAGGTCGACCAATGTTACAGCACTA
CTAGTCAGTTTTACGAGTCGACCGGTACAGTACAATGATGATCATACACG
TTTAGAAACGTTATATATATATATATATTATGAGACAGTATGAATTGCAT
TTACTTTACCAGAACTTATTTTACTAGAGTATAAATATCTGTACGTTTGT
TGAATCTCAGTTTGTGTTCAATTTGTTTCTTCTCAGTTTTTGAGCATATT
TTGATCATATTATTACGATATTTTATTAAATTATATGACTAAAGTAATCA
ATTCATGAATATCGATAAATATGTAAATAACAATTTTAGGAAAAATTGGC
AACGGAAAAAATAGCAAGA
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