EMLSAT00000006577, EMLSAT00000006577-702424 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006577
Unique NameEMLSAT00000006577-702424
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s360supercontigLSalAtl2s360:157972..160449 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006577 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006577EMLSAG00000006577-689343Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028778EMLSAE00000028778-737706Lepeophtheirus salmonisexon
EMLSAE00000028779EMLSAE00000028779-737707Lepeophtheirus salmonisexon
EMLSAE00000028780EMLSAE00000028780-737708Lepeophtheirus salmonisexon
EMLSAE00000028781EMLSAE00000028781-737709Lepeophtheirus salmonisexon
EMLSAE00000028782EMLSAE00000028782-737710Lepeophtheirus salmonisexon
EMLSAE00000028783EMLSAE00000028783-737711Lepeophtheirus salmonisexon
EMLSAE00000028784EMLSAE00000028784-737712Lepeophtheirus salmonisexon
EMLSAE00000028785EMLSAE00000028785-737713Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773506auto773506Lepeophtheirus salmonispolypeptide
EMLSAP00000006577EMLSAP00000006577Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006577

>EMLSAP00000006577 ID=EMLSAP00000006577|Name=EMLSAP00000006577|organism=Lepeophtheirus salmonis|type=polypeptide|length=549bp
MSDVYKPIPRISDESHCHNLETYQLMYDESINNPISFWGKIASQYHWKKS
PSSDEFLKYNFDLHMEVCKFSNVLKSKGVQKGDRVAIYMPMIIELVVAML
ACARIGAVHSIVFGGYSSDSLASRIVDGGAKVLISADGVYRGNKLINLLD
VAYKAMEETSSNYNHDIDIHILVSHIPRLNSGSPLETPSRWKTERDHWWH
EVMEPASDVEWMNSEDPLFLLYTSGSTGKPKGVLHTTAGYMIYAATTFKY
VFDYQDESDVYWCTADIGWITGHTYVTYGPLLNGSKSVLFEGTPFYPTND
RFWEIIQKYSVSKFYTAPTAIRALMKFGEDFVSKYDLSSLKVLGTVGEPI
NPEAWFWYHKNVGGSQCSIVDTYWQTETGGHIMTPLPGCTPTKPGSACFP
FFGVSPVILDESGKVLSGEAEGYIVFNKPWPGMMRSVYGNHERFEKTYFS
RFPGYYMSGDGAKRDKDGYIWITGRIDDMLNCSGHLMSTAQVESALVEHR
HVAEAAVVSTPHPIKGECLYCFITPMADISLNDKMVKELKNLSIICILN
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mRNA from alignment at LSalAtl2s360:157972..160449-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006577-702424 ID=EMLSAT00000006577-702424|Name=EMLSAT00000006577|organism=Lepeophtheirus salmonis|type=mRNA|length=2478bp|location=Sequence derived from alignment at LSalAtl2s360:157972..160449- (Lepeophtheirus salmonis)
TGAAAATACCAATCATGTCAGATGTATACAAGCCTATTCCCCGAATTTCT
GATGAATCTCACTGTCATAATTTGGAAACATATCAACTCATGTATGATGA
ATCAATTAACAATCCGATTTCATTTTGGGGAAAAATTGCAAGTCAATATC
ATTGGAAGAAATCTCCCAGTTCAGACGAGTTTTTGAAATATAATTTCGAT
GTTAATATGGGACCAATTTTTGTTAAATGGATGGCAGATGGTGTCACAAA
TATTTGCTACAATGCCATTGACAGGCATTTACCTAAGAGAGCCAATCAAG
TATTTTTTTTAAATGGCTATGTCATTCTGATTTTAACTTTAACTTTGATT
TTAACTACTAGATTGCGTTCTATTGGGAAGGCAATAATCCAGAGGATACT
GGTAAAATTACTTACAAAGAGCTTCATATGGAAGTTTGCAAATTTTCTAA
TGTACTTAAAAGCAAAGGAGTGCAAAAGGGTGATCGAGTTGCCATTTATA
TGCCAATGATAATAGAATTGGTAGTAGCTATGCTAGCATGTGCAAGAATT
GGAGCTGTCCATTCAATAGTTTTTGGAGGCTATAGTTCTGACTCTTTAGC
ATCAAGAATTGTTGATGGAGGGGCCAAGGTTTTAATATCTGCAGATGGGG
TTTATAGAGGAAATAAATTAATCAATCTTCTAGACGTCGCATATAAGGCA
ATGGAAGAAACTTCTTCAAATTACAGTATATATCTCATATAATAAAAAAG
GTTCATTTTTCAATATAAAATACATGTATTAGACCACGATATAGATATTC
ACATTCTTGTATCCCACATACCTCGATTGAATTCTGGAAGTCCACTTGAA
ACTCCTTCAAGATGGAAAACTGAGAGAGACCATTGGTGGCATGAAGTAAT
GGAGCCTGCGAGTATTGATTGTAAATAACTAGTTCAATTTTTACTATTTT
ATACTAATATATCTAGTGTCTTCTTTAGGTGATGTTGAATGGATGAACTC
TGAAGATCCGTTATTTTTGCTCTATACATCGGGTTCAACGGGTAAACCTA
AAGGTGTACTGCATACTACTGCAGGCTATATGATATATGCGGCAACAACC
TTCAAATATGTTTTTGATTATCAAGATGAGTCAGATGTATATTGGTGTAC
AGCTGATATTGGTAAGTTAGTGTTGGTTTTTACCTATAAATCGATGAATT
TGTGATATATAGGTTGGATTACTGGACATACTTACGTTACTTATGGTCCT
CTTCTGAATGGATCTAAGTCTGTACTCTTTGAAGGAACTCCTTTCTATCC
TACGAATGATCGTTTCTGGGAAATAATTCAAAAGTATTCGGTTAGTAAAT
TTTACACTGCACCTACGGCTATTCGTGCACTAATGAAGTTTGGAGAAGAC
TTCGTCTCTAAATATGATCTGAGTTCTCTGAAAGTACTCGGAACTGTTGG
CGAGCCTATCAATCCTGAAGCTTGGTTTTGGTATCACAAAAATGTCGGAG
GATCTCAATGTTCAATTGTGGACACATATTGGCAAACTGAAACTGGTGGA
CACATAATGACACCATTGCCAGGCTGTACTCCAACAAAGCCAGGTTCAGC
ATGTTTTCCATTCTTTGGAGTTTCACCTGTTATATTAGATGAATCTGGAA
AAGTACTGTCCGGTGAAGCTGAAGGCTATATTGTTTTTAATAAGCCATGG
CCTGGTATGATGCGATCTGTTTATGGAAACCATGAGAGATTCGAAAAAAC
TTATTTTTCTAGGTAAAGTATTATATTTCCAAATGGCAGGGAAGATATTT
TTCTAATGTGTATCAATAGATTTCCAGGTTATTATATGAGTGGAGATGGA
GCAAAGCGTGATAAAGATGGGTATATATGGATAACTGGTCGTATTGATGA
TATGCTAAATTGTTCTGGACATTTGATGTCAACTGCACAAGTTGAGTCAG
CTCTTGTGGAACATAGACATGTAGCCGAAGCAGCAGTTGTGTCTACTCCT
CATCCAATTAAAGGTCCATTTGAGTTTCTGTATAAAATAACATATTTTAC
ATTTTTCATAATGTTTAGGCGAATGTTTATACTGTTTTATCACTCCTATG
GCTGATATATCACTGAATGATAAAATGGTTAAGGAACTCAAAAATCTTGT
AAGAGAAAAGATTGCTCCCTTTGCACAACCTGACTTTATCCAAGAAGCTC
CAAACTTGCCGAAGACGCGTTCTGGAAAAATAATGCGTCGTATCTTGAGA
AAAATTGCACAAGATGATGATGATGTTGGNATATTTCGACGATGGCTGAT
CCTGACGTTGTCAAGATACTTCAAGAAATGAGGAAGAAAATGTTGAATCC
CAATAACTAATTGAATGACTTCGTAAAAACTTACAAAATGTTTGCATTTA
AATCAGTAGCTCTTGTTCAAATATACATACAATAAATAATTTTTATATTT
ATCCCAGAGTATAATATGTATACTTAAC
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