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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s364 | supercontig | LSalAtl2s364:617566..624388 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006628 >EMLSAP00000006628 ID=EMLSAP00000006628|Name=EMLSAP00000006628|organism=Lepeophtheirus salmonis|type=polypeptide|length=648bp
MPCCSAYKCHYKSGDKKSSGNLSFHRFPKDKDLKREWIRNTGRANFQPSE
SAILCSCHFEDDCFKTPRTERPRLKDDAIPTIFKEIPEHLQKEIKLKSFR
RSASKLRSDDWEKKIAKKKCDRLKEKKRQQKLLLKLQKNVFLDHCYSFGD
VQTLERKFMENTERLETLQKKLKIQLARNCQFKKDVNFMKEVIDDLREQK
FVKKGDTEILQDFNGIAIPDLLFRRNKTNQLLNKHNREAYSPEIRKFAET
LSSISMKAYDRRFMNVFLSSIVLRLXXSXCXYRELQKLXATTPTFPGFLN
SISIIKRMGSGSPPRKRPKRSKATKETKKEEVKEKVEDVLDVKKETESPS
DERPDCTQTQKGKKSCNLKITSWNVAGVRAWIKKGXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXPISLRQRNPTSSVFKRRNVPRPKFLELKDYPHQFW
AFAKKEGYSGVALFSKVKPLDVQVGLQSQDHDEEGRIIIAEFEFFFLLTT
YVPNAGRKLVTLDKRLDWDLLLRKKMKELNKKKPVIASGDLNVAHTEIDL
ANPKTNQKNAGFTPEERAGFDDLLSLGFVDTYRKLNPEKTGAYTFWTYMM
NARAKNVGWRLDYFLISDRWFESNVCDSVIRSKVLGSDHCPISLLLHV back to topmRNA from alignment at LSalAtl2s364:617566..624388+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006628-702475 ID=EMLSAT00000006628-702475|Name=EMLSAT00000006628|organism=Lepeophtheirus salmonis|type=mRNA|length=6823bp|location=Sequence derived from alignment at LSalAtl2s364:617566..624388+ (Lepeophtheirus salmonis)
GACCAAACCACCCAGCTTTAATTATGATGCCAAGTTTGAGCGTGATCTGT
AGAACAGTTTGCTTGCAACAGTTGGATAAGTTAGTTTACCTCACTAGTGC
ACCACGATTTCTCACAATTAACGAAATTATTGAACAAAGAGTTTATCTTA
AGTTTTGTATTGCGAACGGAATTTCATATGCTGACACGTTGAAAATGTTA
AAAAAAAGATTTTAGTGAATTAGTTTTATCAGAGACCGTGTATATGAGTG
GCACAAAGCGTTCAAGGATGACCGCGAAATCATAGAAAACATGCCGGGTT
CTGGACGACCTTCGTCCTCTACCACCGAACTGGACATCGATGCAGTGAAG
GAAATTGATTGAGGGAGTTAATTATCACATTGCGTAACATCTCTCACAGG
TCAATTCTGGCAGAAAATTTGGGCATGATACGCGTCAATAAGGATAAAGA
GTACTATTTGGGCGTACTAAGGCGTTTGTGTGAGAAAATCTGTCAAAAAA
GGCCAGAATTATGGAAGAACAACTCGGGGATTTTATACTACGATAACGCG
CCATCGCTCAAATCCACGATTGTGATCGAATTCAAAGCCCAACACGCAAT
AAATACCACCCATATTTTCACTTGATTTAGCTCTGTGTGACTTTTCTGGT
TCCCCAATGCGTGGAAGAAGTTTATGGCCTTGCCAAAAAGTGCCTATAAA
AAATGTTTCGAAGACTGGAAATAACGTTGGCATTTGAGTATTGCATCCAA
TAGAGATTGTTTTGAGGGCGACAAAATATATTTCAATGATTAAATGTAAA
ATTTGTGTTTTATTTTACAATTCCCGGTACTTTTTTGACAGAATTCATAT
TATACATATAAAAATCATAATGCATGTAGCTACAAGCAATTATTAGCTAC
CTACAGATGAAAAAACCTGTAGGTGCCGCTGATAAGTAGCTCTTTAACAA
GCGTGACGTCACTTCAAACATAAATACAATACATACTTTGTTGACTTAAA
AAAGCTAACAGCAGTACAGATGAGTTGACTGCCTTCTTTTATTGTGGCTT
ATATTTACAACTGTTATTATCCAGTTTAACAACTGAATATAAATATTAGG
GAAATATCTACCTAAATCTCTTGTTTAAAGTTTATTAATTTTTATAGTTA
CACATAATAGAACTTCATCTTAAAGATCGAAATGCCGTGTTGTTCCGCGT
ATAAATGCCATTATAAATCGGGGGATAAAAAAAGTTCTGGAAATCTAAGT
TTTCACAGGTTCCCTAAGGATAAGGACCTTAAAAGGTAAATTCATTATTA
AAATATATCTTTATCTAACAACTTAACTGACAACTACAAATAAAGTTATG
TTTTATCAATATTTATTTGTATTAGAGAGTGGATCCGAAACACCGGAAGG
GCCAACTTTCAACCCTCTGAATCTGCAATTCTATGTTCATGTCACTTTGA
GGATGATTGCTTCAAAACTCCTAGGACTGAGCGACCTCGTCTAAAAGATG
ATGCCATTCCAACCATTTTCAAAGAAATTCCAGAACATTTGCAGAAAGAA
ATAAAGCTAAAGAGTTTTCGACGTTCTGCATCAAAACTGAGGTAATTTTT
TTTATCCAAAGTGATTGGGATTGGAATTTTAAAATTTATTGTCAATGATA
CTCAACTCAAAAATCTTACAATGTAGATATTTGAACTTAAATTAAATCAA
TAATTATTAGGTCCGATGATTGGGAAAAAAAGATTGCTAAGAAAAAATGT
GATAGGCTTAAGGAGAAAAAAAGGCAGCAAAAATTACTATTAAAACTTCA
AAAAAATGTCTTCCTTGATCATTGTTATTCTTTTGGTGATGTTCAAACAC
TCGAAAGGAAATTCATGGAAAATACCGAAAGACTGGAGACCTTGCAAAAA
AAGCTAAAAATCCAACTAGCAAGGAATTGTCAATTTAAGAAGGATGTCAA
TTTTATGAAAGTAAAAAAAAATAAATATATATATATATATATTACCTATC
GAAACTTCAAGGAACTACATAAATATGTATTCATTTTCGTATTTTAGGAA
GTAATTGATGACTTAAGAGAGCAGAAGTTTGTTAAGAAAGGAGATACGGA
AATTTTGCAAGATTTTAATGGAATTGCAATTCCTGATCTGCTTTTCCGCC
GTAACAAAACAAACCAATTACTCAATAAACATAATAGAGAGGCTTATTCT
CCAGAAATACGAAAATTCGCCGAAACTCTTTCTTCTATAAGCATGAAAGC
CTATGAGTATGTCCGCAAAACCTTTAATTTTGCATTACCATGTCCAACCA
CATTAAGAAATTGGCATTCAACTACTGATGGTGCCCCTTGATACACTCAC
CAAATTGCCCATAAACTTTACAGGATCGAAATGAAGGTTTCTTAAATATG
CAAACCAACCTCTAAAGCTCATTAATGGCATATTGAATTGAGGCACATTC
AAATCCTCATTAAGAAACTAAATTACAAGAATCAGAAGCCATAGTCAAAT
TTATTATAATTATGGATCGTATATTTGATTGGTGTAATAGGAGAAACTGT
TACGGAAGAGGCTTTAAGGCACCGTTGAAATGCTTGAATGAAGAGTTTTG
GAAGCGATTTAGTGAAGATCGTTTTGATTACATTAAGAATTAAAAAATTA
ATCATTCGACGTTATTATGCAAACTGAGAAAAAAAAAACCTGGTTTTATT
GGTTTCTGTATGGCTATCCTAATTCATTTAGGGTATCTTCAATATTTACA
TCAAGTCTAGTGAGCTAAATTATCTTTTTTCACTCACAAGATGTTCCAAG
ATACTCACGAACTATTTTTTTTGTACAATGCATTGCGAGTTGAGACAAAA
TAACAAATCTACAGTGCGTCAATATATAGTAAGTTTATAATACTTATAAT
ATTAAATTTCAAATATTAAGTATAGAAACCAAAATTTCTTTATCACTTCA
GACAAGTTATAGGAGTCTCCTTATCCATCAGGAAGTCAAAGGAGGATATG
GAAACTACTTGACTTGATAGTTATTTAGCATTGATTAAAAGTATAGATTT
AAGAGGCCAATTTTATATTCAGGGGGTTGGCATTAACTCATTCCAGGATC
CGACTGTTTCATCAAAAGAGAGTCGATAATCCAGAAAATCCCTCGGATAT
CAGTTTTATTCTGAGGACCATGATTTTAATACTTTCATTAAATGCATTAA
AAAAACTTGAATTTTATTTACAGAAAATAAATATCATAGATTAAAAGGAG
TACTTATTAGATAATAATTATTTAATAAGAATGTCATAAATAACTATATG
ACTAATAATTTAGATTAGAAACAATAATTTATATTTTAATTAAATAAGCA
AGTTTAAGGAGCACTGTATAAAATAATATAACAAAATATAAAAAGTTTAA
TATATATATTTCAACATTTAACTGTAGACTGGTATACGTATAAGAATGAC
CACTAGGGTGCCTCTATCCAACAATTTTCATAAACTCAAATTTAACACTA
AGCAGAGGATGTAGGAATTTCTATTGAAAAATTCAAATTACTTCGTCACT
GCCGAATAAATATAGTACATATTGGTATCACTGAAATCAGAAGAAAAAGC
TACATCCTAAAGGATAACTATTGCCTTATATCTAAATTTTTAGTAAGTAT
CATTTTCTTGTGATATAAGCTTTGCTATGAGATTTAATTTTTCACGTTTC
ATTATGTAATCAGTCTTCCAAATACTGTGAATTTTTGTCGCGATACTAGC
GCCTTTAATTCATGGTTAAACGTTCCCTTTCATGCATATATTTTTTTTCT
TTATTCTATTGCTTGCTCGCTCTTTCAATTCGGAATCTTTATTTAATWTT
TTCTTTAGCCGCCGATTCATGAATGTATTTCTGAGCTCTATTGTATTGAG
GCTGCKCTKCAGCTKCTGTSCCTATCGTGAGTTGCAAAAACTASCTGCCA
CAACTCCAACTTTCCCGGGATTTTTGAATTCAATTTCAATAATAAAAAGA
ATGGGATCTGGATCTCCACCTAGAAAAAGACCCAAGAGGTCTAAAGCGAC
CAAGGAAACGAAGAAAGAGGAAGTTAAGGAGAAAGTGGAAGACGTGTTGG
ACGTAAAGAAAGAGACGGAGAGTCCGAGTGATGAGAGGCCGGATTGCACT
CAGACTCAGAAAGGAAAGAAATCCTGCAATTTGAAGATAACGTCATGGAA
CGTGGCCGGTGTCCGTGCTTGGATCAAAAAGGGATNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCTATCTCCTTGAGACAGAGAAACCC
GACATCTTCTGTCTTCAAGAGACGRAATGTTCCGAGACCAAAATTCCTTG
TGAACTAAAAGTGAGTGTTGAAATTTGGCAGTTGGGGCCTCCGGGATTGT
GATGAAAGCCCTTAATGAATTGTCCTCTTTTTAGGAGTTGAAGGACTACC
CTCATCAGTTTTGGGCCTTTGCTAAAAAGGAAGGCTACTCTGGTGTGGCC
CTCTTCTCTAAAGTGAAGCCTCTAGATGTGCAAGTTGGACTCCAATCCCA
GGATCACGACGAGGAAGGACGCATCATCATCGCAGAGTTCGAATTCTTCT
TTCTCCTCACAACTTACGTTCCCAATGCGGGAAGGAAACTGGTCACATTG
GATAAAAGATTGGACTGGGATCTTCTACTCCGAAAGAAAATGAAGGAGTT
GAATAAGAAAAAACCAGTGATTGCCTCTGGGGACTTGAATGTTGCGCACA
CTGAAATTGATCTTGCCAATCCTAAAACTAACCAAAAAAATGCAGGATTT
ACTCCTGAAGAACGCGCAGGATTTGATGATCTACTCTCTTTAGGCTTTGT
GGACACGTACAGAAAGTTGAACCCTGAGAAAACTGGAGCTTATACCTTTT
GGACTTACATGATGAACGCTCGTGCCAAAAATGTAGGTTGGAGATTAGAT
TACTTTTTGATATCAGACAGATGGTTCGAAAGCAACGTATGTGACTCTGT
CATTCGAAGTAAGGTCTTGGGCTCGGATCATTGTCCAATAAGCCTTTTGC
TTCATGTCTGATGAGTAATTCATTATACTCCATATTTTTGATGAAAAGTA
TTTCAAAGTATTATTATATTTAAGGAATATGTTTTTAATACAATTGTAAG
TACAACTTGTTAGTTGACGATGTGTAGAAATAATGATTAATAGACCAACA
TTTATATAATGGAAGGATAATGAAATAATTTCGTTTATTTATTACATGAC
CTTTCTAATTTTCCCCATCTGCATGCATGTATAGTGGAGCTGAGCTACAT
GTTGTTACTAACTATTTATATATTTTAATTTAAACTGTCTCTTTGCTGAA
TATCAATTAAATTATTTTTTATACAGCTATCCATGCGTATCAAAAGGAAA
ATAACATAATTATATATTCAATTAAACATCACTATCATCTGTCGGATAAT
TCCGCCTTCTAACTCTTTGTTGCCCAGGAGCTGCTGTATGGTGATGATAG
TGATGACCTGGATACATTTGCTGCTGCTGTTGTTGCCAGTAAAGTCGTGG
GGGTGGAGGGGGCTTGGGTATTCTATCTGAACCTATTGACGGAAATTCCG
GACTTGACATATCATGTAAACTCATAGACTGAGACGGAGGGTCATCAATA
TTATTGATGGAATTGCATTGGTTATTGATGTCAATTTCTTCCTCTTCTTC
ATCTGAGGGATGATGGTGTAGACTTGGATGGCCACCTCCGTCCCAATTGT
TATTATTCATTCGCGAAGGAGATATTCCTGACAGAGGAGGACGTTTTTTA
CGTTTTCGAGAGGACTCGGAAGACGAGGGAGATTTCGACGGATTTATTCC
TCCGGAATTAACGTCCAGTATCAGTAGTGAACTATGGCTGKGATGAGGAG
CTGTACTCTTTCGAAGAGTTGATTTAGAGTCCTCATGACTGTAACTTCGA
TGAGGTGGAACTGGAGGGGGTGTTGAGGAACTGACTTCATCATCATCAGC
TTGTTTTGCCCAATTATCCACATTCAAACGATTTACACTGCCACAACTAT
TACGATGCACAGCTATCCCTCCACTACTCTGTCGAGCATCCATTGCTAAT
CTCCATGTGGAATCACTAGGGTAAAGCTCTCGCCTAGGTAGAGTATCAAC
TGAGAGAGTGTAGCTATCAATGGGTGTAAGTGCGGTTGAACTACCACCTG
ATCCTCTAAGGCCATTATGTCGTAAGGACCGGATATTATCTTTGGACATT
CTTAGATTCCTTCGTCGTTCGATAGCACCTCTCCATTTATTAATAGCCAT
TCTTGCCATATCAGTTCGTTTCTGTTTTCTCATTTGATGTTTCTTATAGA
TTATTTCAATAACGATTAGACCTAGGCCTCCTATGATTCCAACTCCGACA
AGAATAAAAACKCCTCTCATATTTCGGAGTCCAAGAGTTGCTGGAGAATT
ATCATCTTTAGCTTTGCAATCGTCATCGTTATTTAATAGAATCCATTTAT
TGTCTAGATCTTCCATTTTGCCACCTAGTTTCAGTATAGAAATATATTTT
ATGATATTGATATACAATAAAAGATAATAATATATTATTTTTACTTACTC
TCGTGAAAATCAAGTATAGCCAATGTAACTTTATCAGCCCATGGCGAACC
CTTTTGAAGACCAACTCCATAGCCACTTCGACCGAAAAGATCACCAGCGG
TTATCAAATCACAATCTCTAGCAGCTTCGTACTCAAGTCTTGAGCTGTCC
CATATAAATGCTTTCAATTTTCT back to top
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