EMLSAT00000006651, EMLSAT00000006651-702498 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006651
Unique NameEMLSAT00000006651-702498
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s367supercontigLSalAtl2s367:364632..365848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006651 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006651EMLSAG00000006651-689417Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029141EMLSAE00000029141-738069Lepeophtheirus salmonisexon
EMLSAE00000029142EMLSAE00000029142-738070Lepeophtheirus salmonisexon
EMLSAE00000029143EMLSAE00000029143-738071Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776898auto776898Lepeophtheirus salmonispolypeptide
EMLSAP00000006651EMLSAP00000006651Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006651

>EMLSAP00000006651 ID=EMLSAP00000006651|Name=EMLSAP00000006651|organism=Lepeophtheirus salmonis|type=polypeptide|length=362bp
MYLPKVLFLFFHLLHPNEAQQRRPTISYITQPEIVTDIGGDARMKCSIHY
AQEYPVIWIKLDDVDRNNDLIITTSQTMVLNDPRFSINLDKNSSTYTLGI
NDIQETDAAVYQCQVIISLVDKEVAEVPLIVRRPPIISDNSTRSVVVLAG
QKVELRCYASGYPPPTIYWRRQDNAILPTNTSVFKGNILQFDHVRNDHRG
TYYCVATNVVGTGARRNVYVEVEFAPEITIPRKRLGQALQFDAELVCSID
AYPAPAIEWFKNRKKLQNSQHYTISHYPNSDIITLTRLTVLTIEKKQYSN
YTCRATNTLGESSGTVELFETVVPICPPACGEYTYNSHAVKINFQSKFIY
LISASLLRTFLY
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mRNA from alignment at LSalAtl2s367:364632..365848-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006651-702498 ID=EMLSAT00000006651-702498|Name=EMLSAT00000006651|organism=Lepeophtheirus salmonis|type=mRNA|length=1217bp|location=Sequence derived from alignment at LSalAtl2s367:364632..365848- (Lepeophtheirus salmonis)
ATGTATCTTCCAAAAGTTTTATTTTTGTTCTTCCATCTTTTACATCCTAA
CGAAGCTCAACAAAGAAGACCCACCATTTCATATATAACACAACCAGAAA
TTGTGACTGATATAGGAGGAGATGCTCGTATGAAATGTTCTATCCATTAT
GCTCAAGAATATCCTGTAATATGGATAAAATTAGATGATGTGGATCGTAA
TAATGATCTTATCATAACGACGAGCCAGACTATGGTTTTAAACGATCCTC
GTTTTTCAATCAATTTGGATAAAAATTCATCCACGTATACTCTAGGTAAA
TTTGAAATAAAACATAAAATTCAACCCAATTTGAGATTGAAGAAAACAAC
GAATTATTTTCACAGGAATAAATGATATCCAAGAAACGGATGCCGCTGTC
TACCAATGTCAAGTCATCATATCCTTAGTGGATAAAGAGGTTGCAGAAGT
TCCTTTGATTGTTCGACGCCCTCCTATTATATCAGACAACTCAACAAGAT
CTGTGGTTGTTCTAGCAGGTCAAAAGGTGGAATTAAGGTGCTACGCAAGT
GGATATCCACCACCCACTATTTATTGGCGAAGACAGGACAATGCTATTCT
TCCAACCAACACCTCAGTGTTTAAAGGTATTCATGGCAGATATTAAGCAA
TATCCTGAATTGATTACCTAAACATATGTTTTAGGCAACATCCTGCAATT
TGACCATGTGAGAAATGATCATCGAGGAACCTACTACTGTGTTGCAACGA
ATGTAGTAGGTACAGGTGCTAGGAGAAATGTTTACGTTGAAGTAGAATTT
GCTCCAGAGATTACAATTCCACGAAAAAGATTGGGCCAGGCGTTACAATT
TGATGCAGAGCTTGTTTGTTCAATTGACGCATACCCGGCCCCCGCAATAG
AGTGGTTCAAAAATAGAAAGAAACTTCAAAATTCTCAACATTACACAATT
TCACATTACCCTAATAGTGATATCATCACGTTAACTAGACTTACAGTATT
AACAATAGAAAAGAAACAATACTCAAACTACACATGCAGAGCGACAAATA
CACTTGGTGAATCTTCTGGCACTGTAGAACTCTTCGAGACTGTAGTACCA
ATTTGCCCTCCAGCTTGTGGAGAGTATACGTATAATTCTCATGCTGTCAA
AATTAATTTCCAATCAAAATTTATCTATTTAATTTCAGCATCGCTATTAC
GAACATTTCTATATTAA
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