EMLSAT00000006670, EMLSAT00000006670-702517 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006670
Unique NameEMLSAT00000006670-702517
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s36supercontigLSalAtl2s36:1375840..1376807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006670 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006670EMLSAG00000006670-689436Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029212EMLSAE00000029212-738140Lepeophtheirus salmonisexon
EMLSAE00000029213EMLSAE00000029213-738141Lepeophtheirus salmonisexon
EMLSAE00000029214EMLSAE00000029214-738142Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780706auto780706Lepeophtheirus salmonispolypeptide
EMLSAP00000006670EMLSAP00000006670Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006670

>EMLSAP00000006670 ID=EMLSAP00000006670|Name=EMLSAP00000006670|organism=Lepeophtheirus salmonis|type=polypeptide|length=107bp
MDISSKSDTLFFQNELGGGKSENLLLESEGVETTLCLLQAKLSPASPEMD
PSIRLTLSAAVIRFLNHLSHIGKHRYNCDTFDEAVIKLGIPNWLIGLRSR
CNRFGFK
back to top

mRNA from alignment at LSalAtl2s36:1375840..1376807-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006670-702517 ID=EMLSAT00000006670-702517|Name=EMLSAT00000006670|organism=Lepeophtheirus salmonis|type=mRNA|length=968bp|location=Sequence derived from alignment at LSalAtl2s36:1375840..1376807- (Lepeophtheirus salmonis)
ATGGATATCAGTTCGAAATCAGATACTCTCTTCTTCCAAAACGAATTGGG
AGGAGGCAAAAGCGAGAATCTATTGCTGGAAAGCGAGGGTTGAAAGGCTA
CCCGCAGGMAATGCCTGCTTCTGTTTCTCCATTATTCTTTACACTATTGG
TTATTATTACATATTTAATATATACACGCCGTTTCTTCTTAAATTCCAGG
GGTTGAAACAACACTATGTTTGCTCCAAGCAAAACTATCTCCGGCTTCTC
CGGAAATGGATCCATCTATACGACTGACACTCTCTGCAGCAGTCATAAGA
TTTCTTAATCATTTGTCCCATATCGGCAAACACCGCTACAACTGTGATAC
TTTTGATGAAGCTGTCATCAAACTTGGAATTCCGAATTGGCTTATTGGCC
TTAGGTACCGTATATATTGAAGACATTATCATACATAAAAGCAAGCAATA
TTGAGCAAAAATCAAGAAAATTAAAAATTTAGAGTACATTCTTGCGTTTC
ATAAATACTTCAATAATGCCCTAGAGATAACCAATAATGTCAGCTAGTTT
AGGGTCTTGGTTTGATTTATGAGAGTAAATGTGTTTCCCATATAACATTT
TAAATAAAATACATATCTAGAATGAATTAAAGAATATGTTTGTGAAATGT
ATGATCAATTTGAGGTCCTCTGAAGGGTTAATCAGAATAGTTCATTTATA
TAAAAGGAAGATAACTCACTGGAGAATACTAATAAAATTAATTCTAATTT
TTAATTCGATAAATAATCCTTGCTTGCTTAACTGCGTTAACAGACGTCAA
ATATTATTTTTTAATTTAGACGCCATGTTGTTTTTATAGGCACGAAGCTA
CTCATGGATCAATGACAAATATGGATTTACTTTGTTCCGGACTCGACTTC
TGCTGGAACTGGATTTGTATTAATTACTGGTCTTCAGATCCAGATGTAAT
AGATTCGGATTTAAATGA
back to top
Add to Basket