EMLSAT00000006685, EMLSAT00000006685-702532 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006685
Unique NameEMLSAT00000006685-702532
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s371supercontigLSalAtl2s371:275346..276006 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006685 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006685EMLSAG00000006685-689451Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029311EMLSAE00000029311-738239Lepeophtheirus salmonisexon
EMLSAE00000029312EMLSAE00000029312-738240Lepeophtheirus salmonisexon
EMLSAE00000029313EMLSAE00000029313-738241Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775683auto775683Lepeophtheirus salmonispolypeptide
EMLSAP00000006685EMLSAP00000006685Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006685

>EMLSAP00000006685 ID=EMLSAP00000006685|Name=EMLSAP00000006685|organism=Lepeophtheirus salmonis|type=polypeptide|length=185bp
MKVVDRVLHCRILGHNWDVDSDFIRLGVRKWPNLITVNKRTILSAIARLW
DPLGIVGNSFSIVVGSRNRLGHSSRRKRSGSMEDKNQITGTVEGIGRPEI
HGFVDGGELTYGACVLFRWRVGDGSFEVRFIAAKSYVTPIRIKSIPRIEL
NGLLIMTRLIKSIINALQWETEKLYIWSDSKTELN
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mRNA from alignment at LSalAtl2s371:275346..276006+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006685-702532 ID=EMLSAT00000006685-702532|Name=EMLSAT00000006685|organism=Lepeophtheirus salmonis|type=mRNA|length=661bp|location=Sequence derived from alignment at LSalAtl2s371:275346..276006+ (Lepeophtheirus salmonis)
ATGAAGGTTGTAGATCGTGTTCTGCATTGTCGAAGTTTTAAAATAAAAAG
ATGGTATTCCAGTGCATTAAGCTGAGGAGAATCATGTGTGGTGATTCCAG
TCCTTGGACATAATTGGGACGTGGATTCGGATTTTATTCGACTAGGAGTA
AGAAAATGGCCAAATTTAATCACAGTAAACAAGAGAACGATTTTGTCAGC
TATTGCTCGATTATGGGATCCCCTAGGAATAGTTGGGAATAGCTTTTCAA
TCGTTGTGGGGTCGAGGAATAGATTGGGACACAGTTCCAGAAGAAAAAGA
AGCGGAAGTATGGAAGACAAAAATCAAATAACTGGAACTGTTGAAGGAAG
TACAAATAATAAGATTATTACGTCCAAAAAATGTAGTAGGAAGACCTGAA
ATTCATGGATTTGTTGATGGAGGAGAATTAACTTATGGAGCTTGTGTACT
TTTTCGATGGAGAGTGGGGGACGGAAGTTTTGAAGTCAGGTTTATAGCGG
CGAAGTCTTACGTAACTCCTATTCGAATCAAAAGCATACCTAGAATTGAA
CTAAATGGATTATTGATCATGACAAGACTGATTAAGTCTATTATAAACGC
GTTACAATGGGAAACAGAAAAGCTTTATATTTGGAGTGATTCAAAGACGG
AATTAAACTAG
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